Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: RNA processing

Term: GO:0006396  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40115 SustainPine v3.0 150
AutoFact: FAP multi-domain protein 1.0e-16
Sma3: Glycine-rich protein 3.191e-13
unknown
sp_v3.0_unigene40998 SustainPine v3.0 260
AutoFact: DUF1740 domain containing protein 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Similarity to unknown protein 2.608e-06
Internal
sp_v3.0_unigene41690 SustainPine v3.0 123
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 3.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene41822 SustainPine v3.0 148
AutoFact: Endoribonuclease Dicer homolog 3a n=1 Tax=Oryza sativa Japonica Group RepID=DCL3A_ORYSJ 4.0e-13
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative Endoribonuclease Dicer homolog 9.26e-06
Internal
sp_v3.0_unigene42693 SustainPine v3.0 642
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 0.0
FL-Next: tr=XPA-binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene43302 SustainPine v3.0 363
AutoFact: DUF1740 domain containing protein 1.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Similarity to unknown protein 3.211e-06
Internal
sp_v3.0_unigene43638 SustainPine v3.0 772
AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene44485 SustainPine v3.0 624
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene46988 SustainPine v3.0 2040
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 1.069e-08
Putative Complete
sp_v3.0_unigene47145 SustainPine v3.0 111
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene47195 SustainPine v3.0 231
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RE60_RICCO 2.0e-11
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene47331 SustainPine v3.0 332
AutoFact: dicer-like protein [Oryza sativa Indica Group] 1.0e-17
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene47759 SustainPine v3.0 1072
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene47957 SustainPine v3.0 1461
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene49192 SustainPine v3.0 273
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene49485 SustainPine v3.0 276
AutoFact: tRNA nucleotidyltransferase (CCA-adding enzyme) n=5 Tax=Arabidopsis RepID=F4HUW0_ARATH 2.0e-22
FL-Next: tr=Uncharacterized protein At1g28090.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Poly(A) polymerase, putative 2.257e-08
Internal
sp_v3.0_unigene49941 SustainPine v3.0 402
AutoFact: tRNA nucleotidyltransferase [Lupinus albus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50075 SustainPine v3.0 352
AutoFact: tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis thaliana] gb|AEE30912.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Poly(A) polymerase, putative 2.166e-08
Internal
sp_v3.0_unigene50208 SustainPine v3.0 573
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T2B4_RICCO 7.0e-25
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene50584 SustainPine v3.0 308
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 8.0e-19
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain