Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L1

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2844 SustainPine v3.0 1344
• AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene11399 SustainPine v3.0 2022
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene24617 SustainPine v3.0 460
• AutoFact: large subunit ribosomal protein 1 [Pristionchus sp. 13 RS5231] 6.0e-38
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.202e-32
N-terminus
sp_v3.0_unigene24628 SustainPine v3.0 669
• AutoFact: large subunit ribosomal protein 1 [Pristionchus americanus] 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 5.643e-38
N-terminus
sp_v3.0_unigene26518 SustainPine v3.0 237
• AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.0e-16
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.624e-22
C-terminus
sp_v3.0_unigene28405 SustainPine v3.0 330
• AutoFact: Ribosomal protein n=1 Tax=Caenorhabditis elegans RepID=Q95Y46_CAEEL 4.0e-24
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.108e-29
C-terminus
sp_v3.0_unigene31512 SustainPine v3.0 544
• AutoFact: 60S ribosomal protein L10A n=1 Tax=Ectocarpus siliculosus RepID=D8LNU8_ECTSI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.194e-38
Putative N-terminus
sp_v3.0_unigene31846 SustainPine v3.0 491
• AutoFact: ribosomal protein L10Ae [Scarabaeus laticollis] 5.0e-34
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.115e-35
N-terminus
sp_v3.0_unigene32176 SustainPine v3.0 535
• AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.00004e-41
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 9.308e-36
C-terminus
sp_v3.0_unigene32251 SustainPine v3.0 754
• AutoFact: 60S ribosomal protein L10a n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U9Z3_9EUKA 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.081e-37
Complete
sp_v3.0_unigene32842 SustainPine v3.0 1362
• AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene72041 SustainPine v3.0 323
• AutoFact: 60S ribosomal protein L10a n=41 Tax=Euteleostomi RepID=RL10A_HUMAN 2.0e-38
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 4.118e-16
Putative N-terminus
sp_v3.0_unigene74408 SustainPine v3.0 261
• AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 4.0e-19
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.573e-36
C-terminus
sp_v3.0_unigene74900 SustainPine v3.0 333
• AutoFact: Ribosomal protein n=3 Tax=Chromadorea RepID=A8NG31_BRUMA 1.0e-23
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 6.55e-32
Putative N-terminus
sp_v3.0_unigene75058 SustainPine v3.0 266
• AutoFact: 60s ribosomal protein L10A n=1 Tax=Glossina morsitans morsitans RepID=D3TMC2_GLOMM 4.0e-29
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.605e-34
Internal
sp_v3.0_unigene77025 SustainPine v3.0 201
• AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene119844 SustainPine v3.0 519
• AutoFact: Ribosomal protein n=2 Tax=Chlorella RepID=A9XHZ2_CHLVU 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.709e-38
C-terminus
sp_v3.0_unigene128081 SustainPine v3.0 821
• AutoFact: Ribosomal protein (Fragment) n=7 Tax=Spermatophyta RepID=D7TJ68_VITVI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.709e-38
Complete
sp_v3.0_unigene151050 SustainPine v3.0 345
• AutoFact: S60 ribosomal protein L10a n=1 Tax=Polysphondylium pallidum RepID=D3BAC7_POLPA 6.0e-30
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 3.93e-29
Putative C-terminus
sp_v3.0_unigene151324 SustainPine v3.0 264
• AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 1.0e-19
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.366e-36
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain