Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoskeleton

Term: GO:0005856  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene68456 SustainPine v3.0 174
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 7.0e-10
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: AT3G18780 protein 2.723e-08
Internal
sp_v3.0_unigene71532 SustainPine v3.0 345
AutoFact: Actin-1-like protein (Fragment) n=3 Tax=Spermatophyta RepID=D1MF42_SORBI 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.283e-27
C-terminus
sp_v3.0_unigene72278 SustainPine v3.0 220
AutoFact: ELMO/CED-12 family protein [Arabidopsis thaliana] gb|ABN04737.1| At1g03620 [Arabidopsis thaliana] gb|AEE27590.1| ELMO/CED-12 family protein [Arabidopsis thaliana] 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73223 SustainPine v3.0 237
AutoFact: actin-related protein ARP3 [Physcomitrella patens] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 3 1.531e-12
C-terminus
sp_v3.0_unigene73954 SustainPine v3.0 490
AutoFact: Actin (Fragment) n=6 Tax=core eudicotyledons RepID=Q6PX70_CAPAN 2.0e-36
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin-3 2.548e-07
Putative N-terminus
sp_v3.0_unigene74407 SustainPine v3.0 393
AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 4.0e-16
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene74454 SustainPine v3.0 191
AutoFact: Villin-4 n=4 Tax=Arabidopsis RepID=VILI4_ARATH 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74606 SustainPine v3.0 164
AutoFact: PREDICTED: Actin, cytoplasmic-like isoform 1 n=3 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBB3B 6.0e-07
FL-Next: sp=Actin-2; Phytophthora infestans (Potato late blight fungus). 0.0
N-terminus
sp_v3.0_unigene74652 SustainPine v3.0 211
AutoFact: actin-related protein 3 [Nicotiana tabacum] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 3 9.708e-13
Internal
sp_v3.0_unigene74838 SustainPine v3.0 269
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1 2.228e-06
Internal
sp_v3.0_unigene75051 SustainPine v3.0 363
AutoFact: Actin, macronuclear n=3 Tax=Tetrahymena RepID=ACT1_TETTH 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.778e-37
Internal
sp_v3.0_unigene75454 SustainPine v3.0 158
AutoFact: 26S proteasome regulatory complex, ATPase RPT4 n=3 Tax=Agaricales RepID=B0CU44_LACBS 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 2.463e-13
Internal
sp_v3.0_unigene75910 SustainPine v3.0 358
AutoFact: Actin-related protein 2 n=4 Tax=Poaceae RepID=ARP2_ORYSJ 9.0e-10
FL-Next: sp=Actin-related protein 2; Oryza sativa subsp. indica (Rice). 0.0
C-terminus
sp_v3.0_unigene76471 SustainPine v3.0 240
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 1.0e-14
FL-Next: sp=Fimbrin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Fimbrin, putative 4.732e-09
Internal
sp_v3.0_unigene76478 SustainPine v3.0 253
AutoFact: Actin-related protein 6 n=5 Tax=Camelineae RepID=ARP6_ARATH 8.0e-09
FL-Next: sp=Actin-related protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Actin-related protein 6 1.077e-08
C-terminus
sp_v3.0_unigene76828 SustainPine v3.0 371
AutoFact: PREDICTED: similar to cytoplasmic beta-actin n=1 Tax=Canis lupus familiaris RepID=UPI00005A055D 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.779e-18
C-terminus
sp_v3.0_unigene77503 SustainPine v3.0 390
AutoFact: Actin (Fragment) n=30 Tax=Viridiplantae RepID=O48669_CUCSA 5.0e-35
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 1 2.605e-06
Internal
sp_v3.0_unigene77624 SustainPine v3.0 232
AutoFact: valosin-containing protein [Coprinopsis cinerea okayama7#130] gb|EAU90639.1| valosin-containing protein [Coprinopsis cinerea okayama7#130] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 9.507e-15
Internal
sp_v3.0_unigene78082 SustainPine v3.0 159
AutoFact: ARPC p20 [Glycine max] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: cDNA clone:J033082P03, full insert sequence 6.823e-06
C-terminus
sp_v3.0_unigene78112 SustainPine v3.0 294
AutoFact: Fragmin60 n=1 Tax=Physarum polycephalum RepID=Q9GSL1_PHYPO 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative villin 3.655e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain