Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene208463 SustainPine v3.0 754
• AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
• FL-Next: tr=NADPH-protochlorophyllide-oxidoreductase; Pinus mugo (Dwarf mountain pine). 0.0
• Sma3: NADPH-protochlorophyllide oxidoreductase 5.047e-23
C-terminus
sp_v3.0_unigene208466 SustainPine v3.0 431
• AutoFact: 40S ribosomal protein S4-1 [Arabidopsis thaliana] sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1 gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana] gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana] gb|AAL341 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.456e-24
N-terminus
sp_v3.0_unigene208468 SustainPine v3.0 627
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99967e-42
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene208473 SustainPine v3.0 669
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene208474 SustainPine v3.0 902
• AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
Complete
sp_v3.0_unigene208497 SustainPine v3.0 382
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene208499 SustainPine v3.0 281
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 6.0e-28
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.357e-39
Internal
sp_v3.0_unigene208511 SustainPine v3.0 471
• AutoFact: RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 2.34e-10
C-terminus
sp_v3.0_unigene208513 SustainPine v3.0 967
• AutoFact: diaminopimelate decarboxylase 2 [Arabidopsis thaliana] sp|Q94A94.1|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gb|AAM98306. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 9.315e-12
C-terminus
sp_v3.0_unigene208514 SustainPine v3.0 372
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light-induced protein 5.192e-19
C-terminus
sp_v3.0_unigene208515 SustainPine v3.0 263
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Internal
sp_v3.0_unigene208531 SustainPine v3.0 602
• AutoFact: Photosystem I reaction center subunit psaK, chloroplastic n=3 Tax=BEP clade RepID=PSAK_HORVU 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I subunit X 3.742e-14
Complete
sp_v3.0_unigene208537 SustainPine v3.0 443
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 1.718e-34
Internal
sp_v3.0_unigene208538 SustainPine v3.0 318
• AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin-like protein 9.763e-07
N-terminus
sp_v3.0_unigene208546 SustainPine v3.0 781
• AutoFact: heat shock protein 81-1 [Arabidopsis thaliana] dbj|BAA98082.1| heat-shock protein [Arabidopsis thaliana] gb|AAM91104.1| AT5g52640/F6N7_13 [Arabidopsis thaliana] gb|AAN46890.1| At5g52640/F6N7_13 [Arabidopsis thaliana] gb|AED96244.1| heat shock protein 81-1 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene208559 SustainPine v3.0 570
• AutoFact: Heat shock 70 kDa protein, mitochondrial n=1 Tax=Solanum tuberosum RepID=HSP7M_SOLTU 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock 70 kDa protein, mitochondrial 2.13e-12
C-terminus
sp_v3.0_unigene208564 SustainPine v3.0 626
• AutoFact: Putative alpha-xylosidase n=1 Tax=Pinus pinaster RepID=Q8VWV9_PINPS 0.0
• FL-Next: tr=Putative alpha-xylosidase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Alpha-glucosidase 8.599e-12
Internal
sp_v3.0_unigene208605 SustainPine v3.0 595
• AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
• FL-Next: sp=Abietadiene synthase, chloroplastic; Abies grandis (Grand fir). 0.0
• Sma3: Copalyl diphosphate synthase 2.125e-17
Internal
sp_v3.0_unigene208626 SustainPine v3.0 526
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208645 SustainPine v3.0 332
• AutoFact: prohibitin-like protein [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Prohibitin 1.765e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain