Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene207795 SustainPine v3.0 531
• AutoFact: Glutaredoxin n=2 Tax=Ricinus communis RepID=GLRX_RICCO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutaredoxin 6.914e-31
Putative Complete
sp_v3.0_unigene207797 SustainPine v3.0 528
• AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
• FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Actin 2.031e-37
Putative C-terminus
sp_v3.0_unigene207815 SustainPine v3.0 492
• AutoFact: Light-harvesting complex n=1 Tax=Selaginella moellendorffii RepID=D8SUF1_SELML 8.00001e-42
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 8.341e-22
C-terminus
sp_v3.0_unigene207816 SustainPine v3.0 491
• AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
• FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
• Sma3: Actin 1.792e-09
N-terminus
sp_v3.0_unigene207818 SustainPine v3.0 489
• AutoFact: Galactolipid galactosyltransferase n=1 Tax=Chlamydomonas reinhardtii RepID=A8HU66_CHLRE 0.0
• FL-Next: Isoform 2 of Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 0.0
• Sma3: Digalactosyldiacylglycerol synthase 2, chloroplastic 2.329e-12
Internal
sp_v3.0_unigene207837 SustainPine v3.0 469
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UAQ2_VITVI 1.0e-32
• FL-Next: sp=Probable galactinol--sucrose galactosyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative seed imbibition protein 9.548e-09
Internal
sp_v3.0_unigene207850 SustainPine v3.0 449
• AutoFact: Putative beta-glucosidase 41 n=2 Tax=Arabidopsis RepID=BGL41_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase 1.299e-26
Internal
sp_v3.0_unigene207873 SustainPine v3.0 429
• AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 9.0e-26
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene207879 SustainPine v3.0 419
• AutoFact: Ribulose bisphosphate carboxylase small chain n=6 Tax=Pinaceae RepID=A9NZM2_PICSI 2.0e-26
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 7.303e-10
Putative Complete
sp_v3.0_unigene207902 SustainPine v3.0 381
• AutoFact: prolyl oligopeptidase-like protein [Arabidopsis thaliana] gb|AEE35801.1| prolyl oligopeptidase-like protein [Arabidopsis thaliana] 8.0e-37
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Putative prolyl endopeptidase 5.451e-09
Internal
sp_v3.0_unigene207910 SustainPine v3.0 369
• AutoFact: Tau class glutathione S-transferase n=2 Tax=Pinus RepID=D3YLT8_9CONI 1.96182e-44
• FL-Next: tr=Tau class glutathione S-transferase; Pinus brutia. 0.0
• Sma3: Glutathione s-transferase, putative 2.64986e-42
Putative N-terminus
sp_v3.0_unigene207932 SustainPine v3.0 345
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative N-terminus
sp_v3.0_unigene207985 SustainPine v3.0 286
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 2.00386e-43
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 8.322e-29
Putative C-terminus
sp_v3.0_unigene208028 SustainPine v3.0 240
• AutoFact: Acetohydroxyacid isomeroreductase n=1 Tax=Glycine max RepID=D2DKE6_SOYBN 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ketol-acid reductoisomerase 1.611e-14
Internal
sp_v3.0_unigene208031 SustainPine v3.0 238
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene208055 SustainPine v3.0 218
• AutoFact: 40S ribosomal protein S3a n=8 Tax=fabids RepID=RS3A_CICAR 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 6.1e-21
C-terminus
sp_v3.0_unigene208058 SustainPine v3.0 215
• AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 4.0e-24
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene208082 SustainPine v3.0 195
• AutoFact: Probable trans-2-enoyl-CoA reductase, mitochondrial n=3 Tax=Arabidopsis RepID=MECR_ARATH 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208095 SustainPine v3.0 180
• AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 dbj|BAA89498.1| cyc07 [Daucus carota] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.897e-25
Internal
sp_v3.0_unigene208100 SustainPine v3.0 173
• FL-Next: sp=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val intergenic region; fertilis var. ferax). Plastid; Chloroplast. 0.0
• Sma3: Uncharacterized 8.8 kDa protein in rps12-tRNA-Val intergenic region 1.949e-06
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain