Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4670 SustainPine v3.0 831
• AutoFact: Carotenoid cleavage dioxygenase 4a n=1 Tax=Citrus clementina RepID=A0SE35_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 2.733e-22
Putative N-terminus
sp_v3.0_unigene4671 SustainPine v3.0 277
• AutoFact: Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative aconitase 1.976e-14
Internal
sp_v3.0_unigene4674 SustainPine v3.0 321
• AutoFact: Putative beta-glucosidase [Oryza sativa Japonica Group] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 1.822e-34
Putative C-terminus
sp_v3.0_unigene4677 SustainPine v3.0 623
• AutoFact: (-)-linalool-like synthase n=1 Tax=Picea sitchensis RepID=Q20HU8_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copalyl diphosphate synthase 9.006e-16
N-terminus
sp_v3.0_unigene4694 SustainPine v3.0 404
• AutoFact: chloride channel protein CLC-e [Arabidopsis thaliana] sp|Q8GX93.2|CLCE_ARATH RecName: Full=Chloride channel protein CLC-e; Short=AtCLC-e gb|AEE86510.1| chloride channel protein CLC-e [Arabidopsis thaliana] 4.0e-23
• FL-Next: sp=Chloride channel protein CLC-e; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Voltage-gated clc-type chloride channel, putative 2.807e-08
Internal
sp_v3.0_unigene4697 SustainPine v3.0 372
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal
sp_v3.0_unigene4771 SustainPine v3.0 555
• AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene4782 SustainPine v3.0 315
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06430, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2750; Flags: Precursor gb|AAF08573.1|AC01 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4783 SustainPine v3.0 566
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene4819 SustainPine v3.0 798
• AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 5.0e-36
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene4834 SustainPine v3.0 536
• AutoFact: aldehyde dehydrogenase [Crocus sativus] 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 1.012e-31
N-terminus
sp_v3.0_unigene4839 SustainPine v3.0 727
• AutoFact: APO protein 4 [Arabidopsis thaliana] sp|Q9LSZ0.2|APO4_ARATH RecName: Full=APO protein 4, mitochondrial; Flags: Precursor dbj|BAC42155.1| unknown protein [Arabidopsis thaliana] gb|ABF85786.1| At3g21740 [Arabidopsis thaliana] gb|AEE76547.1| APO protein 4 [A 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4850 SustainPine v3.0 374
• AutoFact: 70-kD heat shock protein (Fragment) n=1 Tax=Solanum tuberosum RepID=Q41459_SOLTU 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 4.701e-28
N-terminus
sp_v3.0_unigene4872 SustainPine v3.0 752
• AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 5.99756e-43
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.331e-35
C-terminus
sp_v3.0_unigene4874 SustainPine v3.0 718
• AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 0.0
• FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 6.109e-06
Internal
sp_v3.0_unigene4885 SustainPine v3.0 341
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.65e-11
C-terminus
sp_v3.0_unigene4896 SustainPine v3.0 878
• AutoFact: Peptidase S41 family protein [Arabidopsis thaliana] gb|AAL11596.1|AF424602_1 AT4g17740/dl4905c [Arabidopsis thaliana] emb|CAB10554.1| PSII D1 protein processing enzyme [Arabidopsis thaliana] emb|CAB78777.1| PSII D1 protein processing enzyme [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II D1 protease 5.889e-13
Putative N-terminus
sp_v3.0_unigene4897 SustainPine v3.0 296
• AutoFact: 40S ribosomal protein S7-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRX6_SOLTU 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.196e-26
C-terminus
sp_v3.0_unigene4898 SustainPine v3.0 588
• AutoFact: Ribosomal protein L4/L1 n=3 Tax=Agaricomycetes RepID=A8N1B9_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.955e-36
Complete
sp_v3.0_unigene4909 SustainPine v3.0 362
• AutoFact: Glycoprotein-like protein n=2 Tax=core eudicotyledons RepID=Q3HVK7_SOLTU 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 1.95e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain