Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4526 SustainPine v3.0 526
• AutoFact: RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gb|AAA68094.1| ATP-dependent protease proteolytic subunit [Pinus contorta] 1.0e-11
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
N-terminus
sp_v3.0_unigene4532 SustainPine v3.0 496
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene4541 SustainPine v3.0 871
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 8.677e-13
Putative C-terminus
sp_v3.0_unigene4553 SustainPine v3.0 487
• AutoFact: Class I glutamine amidotransferase domain-containing protein n=2 Tax=Arabidopsis RepID=Q8VY09_ARATH 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene4577 SustainPine v3.0 758
• AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAF21211.1|AC013483_35 unknown protein [Arabidopsis thaliana] gb|AAL61923.1| unknown protein [Arabidopsis thaliana] gb|AAN65055.1| unknown protein [Arabidopsis thaliana] gb|AEE74630.1| RNA binding protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tab2 protein 7.852e-10
N-terminus
sp_v3.0_unigene4581 SustainPine v3.0 464
• AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Annona cherimola RepID=B8XXI4_ANNCH 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 9.775e-22
N-terminus
sp_v3.0_unigene4590 SustainPine v3.0 376
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene4592 SustainPine v3.0 438
• AutoFact: PsbW domain containing protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene4613 SustainPine v3.0 340
• AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 3.0e-21
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene4615 SustainPine v3.0 945
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene4621 SustainPine v3.0 752
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein ycf45; Porphyra purpurea. Plastid; Chloroplast. 0.0
• Sma3: Uncharacterized protein ycf45 4.794e-12
Putative N-terminus
sp_v3.0_unigene4624 SustainPine v3.0 733
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SM71_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 39 2.9e-09
Internal
sp_v3.0_unigene4626 SustainPine v3.0 468
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 2.777e-12
N-terminus
sp_v3.0_unigene4631 SustainPine v3.0 1082
• AutoFact: Lipoxygenase n=1 Tax=Sesbania rostrata RepID=Q93YA9_SESRO 0.0
• FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene4638 SustainPine v3.0 1857
• AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-xylosidase 1.214e-13
Complete
sp_v3.0_unigene4639 SustainPine v3.0 854
• AutoFact: allene oxide synthase [Hevea brasiliensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Allene oxide synthase 0.0
C-terminus
sp_v3.0_unigene4647 SustainPine v3.0 624
• AutoFact: synaptosomal associated protein, putative; K08508 synaptosomal-associated protein, 23kDa 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Synaptosomal associated protein, putative 2.399e-09
C-terminus
sp_v3.0_unigene4651 SustainPine v3.0 1309
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.554e-09
Complete
sp_v3.0_unigene4661 SustainPine v3.0 323
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal
sp_v3.0_unigene4663 SustainPine v3.0 549
• AutoFact: DEAD-box ATP-dependent RNA helicase 50 [Arabidopsis thaliana] sp|Q8GUG7.2|RH50_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 50 gb|AAF27002.1|AC016827_13 putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAK82522.1| AT3g06980/F17A9_13 [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 50 2.304e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain