Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4300 SustainPine v3.0 1485
• AutoFact: putative potassium transporter [Oryza sativa Japonica Group] gb|EAZ05084.1| hypothetical protein OsI_27274 [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium transporter, putative 1.822e-30
Complete
sp_v3.0_unigene4308 SustainPine v3.0 437
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene4325 SustainPine v3.0 458
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4336 SustainPine v3.0 468
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene4340 SustainPine v3.0 1357
• AutoFact: DUF1995 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4345 SustainPine v3.0 432
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 7.519e-17
Putative Complete
sp_v3.0_unigene4359 SustainPine v3.0 308
• AutoFact: putative 60S ribosomal L28 protein [Oryza sativa Japonica Group] dbj|BAG90048.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L28 2.156e-12
N-terminus
sp_v3.0_unigene4361 SustainPine v3.0 575
• AutoFact: Embryo defective 2765 (Fragment) n=3 Tax=Rafflesiaceae RepID=D3U081_RAFTU 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene4373 SustainPine v3.0 407
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
C-terminus
sp_v3.0_unigene4384 SustainPine v3.0 503
• AutoFact: serine acetyltransferase 7 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine acetyltransferase 2.825e-33
Internal
sp_v3.0_unigene4399 SustainPine v3.0 1718
• AutoFact: Cytosolic aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q9LRE9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Betaine aldehyde dehydrogenase 0.0
Complete
sp_v3.0_unigene4400 SustainPine v3.0 455
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.952e-15
Internal
sp_v3.0_unigene4402 SustainPine v3.0 894
• AutoFact: Probable glutathione S-transferase n=1 Tax=Picea mariana RepID=O65056_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase GSTU6 6.011e-30
Putative Complete
sp_v3.0_unigene4405 SustainPine v3.0 643
• AutoFact: chlorophyll a/b-binding protein [Picea glauca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.843e-21
Complete
sp_v3.0_unigene4413 SustainPine v3.0 714
• AutoFact: antitermination NusB domain-containing protein [Arabidopsis thaliana] gb|AAK96755.1| putative protein [Arabidopsis thaliana] gb|AAP42720.1| At4g26370 [Arabidopsis thaliana] gb|AEE85189.1| antitermination NusB domain-containing protein [Arabidopsis thalian 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene4435 SustainPine v3.0 1165
• AutoFact: [R] COG2503 Predicted secreted acid phosphatase 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acid phosphatase 1, putative 3.8e-16
Complete
sp_v3.0_unigene4473 SustainPine v3.0 724
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Flags: Precursor dbj|BAE98748.1| membrane-associated salt-inducible protein isol 5.0e-27
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g10910, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pentatricopeptide repeat-containing protein At1g10910, chloroplastic 6.335e-06
C-terminus
sp_v3.0_unigene4480 SustainPine v3.0 484
• AutoFact: Expansin-3 n=1 Tax=Petunia x hybrida RepID=Q6RX67_PETHY 3.0e-25
• FL-Next: tr=Expansin 1; Cunninghamia lanceolata (China fir). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene4518 SustainPine v3.0 2381
• AutoFact: cell division protease ftsH-12 [Arabidopsis thaliana] sp|Q9SAJ3.2|FTSHC_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 12, chloroplastic; Short=AtFTSH12; Flags: Precursor dbj|BAH20273.1| AT1G79560 [Arabidopsis thaliana] gb|AEE36264.1| cell di 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4520 SustainPine v3.0 350
• AutoFact: Photosystem I assembly protein ycf3 n=1 Tax=Pinus thunbergii RepID=C3VYX2_PINTH 4.00001e-40
• FL-Next: sp=Photosystem I assembly protein ycf3; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I assembly protein ycf3 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain