Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene350 SustainPine v3.0 1553
AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 0.0
FL-Next: sp=50S ribosomal protein L2, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein L2 0.0
Putative Complete
sp_v3.0_unigene2393 SustainPine v3.0 890
AutoFact: Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana] gb|AAM63019.1| unknown [Arabidopsis thaliana] gb|ABF83687.1| At4g28360 [Arabidopsis thaliana] dbj|BAE99833.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85473.1| Ribosomal protein L2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene2765 SustainPine v3.0 1221
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3608 SustainPine v3.0 854
AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene7906 SustainPine v3.0 1396
AutoFact: 50S ribosomal protein L15, putative n=1 Tax=Ricinus communis RepID=B9T052_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11399 SustainPine v3.0 2022
AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene13015 SustainPine v3.0 1767
AutoFact: ribosomal protein L18e/L15 [Arabidopsis thaliana] dbj|BAB11434.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91235.1| unknown protein [Arabidopsis thaliana] gb|AAM62464.1| unknown [Arabidopsis thaliana] gb|AAM91243.1| unknown protein [Arabidopsi 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene16927 SustainPine v3.0 1394
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17187 SustainPine v3.0 1089
AutoFact: large subunit ribosomal protein L30 [Arabidopsis thaliana] gb|AAM67016.1| unknown [Arabidopsis thaliana] gb|ABD38899.1| At5g55140 [Arabidopsis thaliana] gb|AED96591.1| large subunit ribosomal protein L30 [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Ribosomal protein L30 family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene17419 SustainPine v3.0 1201
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17751 SustainPine v3.0 1163
AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene17792 SustainPine v3.0 1978
AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 1.092e-27
Complete
sp_v3.0_unigene17819 SustainPine v3.0 2403
AutoFact: RecName: Full=Mitochondrial-processing peptidase subunit alpha; AltName: Full=Alpha-MPP; AltName: Full=Ubiquinol-cytochrome-c reductase subunit II; Flags: Precursor emb|CAA46990.1| mitochondrial processing peptidase [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitochondrial processing peptidase alpha subunit, putative 2.835e-08
Complete
sp_v3.0_unigene18527 SustainPine v3.0 659
AutoFact: 50S ribosomal protein L2, chloroplastic n=29 Tax=Pinaceae RepID=RK2_PINKO 0.0
FL-Next: sp=50S ribosomal protein L2, chloroplastic; Pinus arizonica. Plastid; Chloroplast. 0.0
Sma3: 50S ribosomal protein L2, chloroplastic 0.0
Internal
sp_v3.0_unigene22091 SustainPine v3.0 595
AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 3.9937e-43
FL-Next: sp=50S ribosomal protein L2, chloroplastic; Taiwania cryptomerioides. Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein L2 7.498e-31
N-terminus
sp_v3.0_unigene23192 SustainPine v3.0 689
AutoFact: 60S ribosomal protein L13a n=1 Tax=Ornithoctonus huwena RepID=B5M6D3_HAPSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 5.409e-21
Complete
sp_v3.0_unigene23331 SustainPine v3.0 502
AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 5.644e-11
Complete
sp_v3.0_unigene23475 SustainPine v3.0 501
AutoFact: RecName: Full=60S ribosomal protein L17 gb|AAX48849.1| L17 [Suberites domuncula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.39e-10
N-terminus
sp_v3.0_unigene23628 SustainPine v3.0 656
AutoFact: Putative ribosomal protein L17 (Fragment) n=1 Tax=Sipunculus nudus RepID=A8U9R6_SIPNU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.39e-10
Complete
sp_v3.0_unigene24071 SustainPine v3.0 1219
AutoFact: ribosomal L.2-like protein [Arabidopsis thaliana] gb|AAL16127.1|AF428295_1 At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AAN18114.1| At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AEE30726.1| ribosomal L.2-like protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain