Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154836 SustainPine v3.0 444
• AutoFact: PREDICTED: similar to 60S ribosomal protein L17 n=1 Tax=Hydra magnipapillata RepID=UPI0001926931 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 8.7e-11
C-terminus
sp_v3.0_unigene154946 SustainPine v3.0 463
• AutoFact: 60S ribosomal protein L26-2 [Arabidopsis thaliana] sp|Q9FJX2.1|RL262_ARATH RecName: Full=60S ribosomal protein L26-2 dbj|BAB08459.1| 60S ribosomal protein L26 [Arabidopsis thaliana] gb|AAL38285.1| 60S ribosomal protein L26 [Arabidopsis thaliana] gb|AAM101 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.248e-11
Complete
sp_v3.0_unigene154997 SustainPine v3.0 441
• AutoFact: Ribosomal protein L16a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C119_9EUKA 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 6.541e-21
C-terminus
sp_v3.0_unigene155315 SustainPine v3.0 257
• AutoFact: 60S ribosomal protein L17, putative n=1 Tax=Pediculus humanus corporis RepID=E0VJH3_PEDHC 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.208e-08
N-terminus
sp_v3.0_unigene155377 SustainPine v3.0 494
• AutoFact: 60S ribosomal protein L7 [Neosartorya fischeri NRRL 181] gb|EAW20520.1| 60S ribosomal protein L7 [Neosartorya fischeri NRRL 181] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 5.606e-15
C-terminus
sp_v3.0_unigene155433 SustainPine v3.0 479
• AutoFact: 60S ribosomal protein L7 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WTG6_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.314e-07
C-terminus
sp_v3.0_unigene155437 SustainPine v3.0 152
• AutoFact: 60S ribosomal protein L17-2 [Arabidopsis thaliana] ref|XP_002887121.1| 60S ribosomal protein L17 [Arabidopsis lyrata subsp. lyrata] sp|P51413.2|RL172_ARATH RecName: Full=60S ribosomal protein L17-2 gb|AAC18792.1| Similar to ribosomal protein L17 gb|X62724 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.26e-08
Internal
sp_v3.0_unigene155667 SustainPine v3.0 558
• AutoFact: 50S ribosomal protein L1 n=34 Tax=Pseudomonas RepID=RL1_PSE14 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.26e-38
Internal
sp_v3.0_unigene155703 SustainPine v3.0 502
• AutoFact: ribosomal protein L22 containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A0A1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
N-terminus
sp_v3.0_unigene155838 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.509e-10
Putative N-terminus
sp_v3.0_unigene155863 SustainPine v3.0 465
• AutoFact: 60S ribosomal protein L26 n=2 Tax=Sclerotiniaceae RepID=A6RXB8_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.124e-11
Putative Complete
sp_v3.0_unigene156102 SustainPine v3.0 236
• AutoFact: 60S ribosomal protein L26 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGR3_9EUKA 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.135e-11
N-terminus
sp_v3.0_unigene156132 SustainPine v3.0 432
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 6.696e-21
Putative N-terminus
sp_v3.0_unigene156151 SustainPine v3.0 452
• AutoFact: Ribosomal protein L13 n=1 Tax=Uroleptus sp. WJC-2003 RepID=Q2THG7_9SPIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 1.658e-20
N-terminus
sp_v3.0_unigene156277 SustainPine v3.0 257
• AutoFact: Ribosomal protein L7 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWB7_9EUKA 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156336 SustainPine v3.0 319
• AutoFact: Ribosomal_L22 domain-containing protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C9Z9_9EUKA 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.061e-10
C-terminus
sp_v3.0_unigene156371 SustainPine v3.0 436
• AutoFact: putative L24 ribosomal protein [Ipomoea batatas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene156533 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L17 [Zea mays] sp|O48557.1|RL17_MAIZE RecName: Full=60S ribosomal protein L17 gb|AAB88619.1| ribosomal protein L17 [Zea mays] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.278e-10
C-terminus
sp_v3.0_unigene156563 SustainPine v3.0 349
• AutoFact: Ribosomal protein L7e n=1 Tax=Agriotes lineatus RepID=Q4GXM4_AGRLI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 1.012e-07
C-terminus
sp_v3.0_unigene156860 SustainPine v3.0 451
• AutoFact: Ribosomal protein L16a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C119_9EUKA 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 8.606e-21
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain