Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152761 SustainPine v3.0 472
• AutoFact: 60S ribosomal protein L7, putative n=7 Tax=Eukaryota RepID=C9ZS67_TRYB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.048e-07
Putative C-terminus
sp_v3.0_unigene152839 SustainPine v3.0 497
• AutoFact: 60S ribosomal protein L16 n=1 Tax=Arthroderma otae CBS 113480 RepID=C5FDH3_ARTOC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 4.019e-21
Putative N-terminus
sp_v3.0_unigene152885 SustainPine v3.0 356
• AutoFact: Ribosomal protein L2 n=1 Tax=Ochromonas danica RepID=Q9G918_OCHDN 1.0e-17
• FL-Next: sp=50S ribosomal protein L2, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein L2 2.117e-24
Putative C-terminus
sp_v3.0_unigene153004 SustainPine v3.0 408
• AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Petromyzon marinus RepID=Q801I3_PETMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 4.403e-15
Putative C-terminus
sp_v3.0_unigene153170 SustainPine v3.0 317
• AutoFact: Putative 60S Ribosomal protein L7-like (Fragment) n=1 Tax=Hottentotta judaicus RepID=F1CJ04_BUTJU 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 3.283e-11
C-terminus
sp_v3.0_unigene153174 SustainPine v3.0 425
• AutoFact: ribosomal protein L17 [Ictalurus punctatus] gb|AAK95143.1|AF401571_1 ribosomal protein L17 [Ictalurus punctatus] 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene153197 SustainPine v3.0 509
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Ectocarpus siliculosus RepID=D7G6W9_ECTSI 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 6.853e-21
C-terminus
sp_v3.0_unigene153234 SustainPine v3.0 493
• AutoFact: ribosomal protein [Petunia x hybrida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative N-terminus
sp_v3.0_unigene153298 SustainPine v3.0 288
• AutoFact: ribosomal protein [Petunia x hybrida] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
C-terminus
sp_v3.0_unigene153341 SustainPine v3.0 417
• AutoFact: Ribosomal protein L13 n=1 Tax=Uroleptus sp. WJC-2003 RepID=Q2THG7_9SPIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 1.119e-20
Internal
sp_v3.0_unigene153468 SustainPine v3.0 348
• AutoFact: 60S ribosomal protein L13, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MU72_PHYIT 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 3.27e-21
N-terminus
sp_v3.0_unigene153781 SustainPine v3.0 476
• AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
N-terminus
sp_v3.0_unigene153791 SustainPine v3.0 322
• AutoFact: ribosomal protein L24, putative [Oryza sativa Japonica Group] gb|EAY79967.1| hypothetical protein OsI_35131 [Oryza sativa Indica Group] gb|EAZ17457.1| hypothetical protein OsJ_32984 [Oryza sativa Japonica Group] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Putative C-terminus
sp_v3.0_unigene153806 SustainPine v3.0 365
• AutoFact: RL13A, ribosomal protein 13A 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C0R3_THAPS 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 3.12e-17
C-terminus
sp_v3.0_unigene153908 SustainPine v3.0 428
• AutoFact: Ribosomal protein rpl13a n=1 Tax=Eurythoe complanata RepID=A8UG34_EURCO 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 3.185e-21
C-terminus
sp_v3.0_unigene154263 SustainPine v3.0 390
• AutoFact: Putative ribosomal protein L7 (Fragment) n=1 Tax=Sipunculus nudus RepID=A8U9P1_SIPNU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 2.957e-15
Internal
sp_v3.0_unigene154392 SustainPine v3.0 380
• AutoFact: 60S ribosomal protein l26 n=1 Tax=Lycosa singoriensis RepID=A9QQ76_LYCSI 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 3.66e-11
Putative C-terminus
sp_v3.0_unigene154409 SustainPine v3.0 439
• AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Chaetomium RepID=Q1HEQ0_9PEZI 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene154459 SustainPine v3.0 350
• AutoFact: 50S ribosomal protein L2 n=2 Tax=Asticcacaulis RepID=E8RLL2_9CAUL 2.0e-11
• FL-Next: sp=50S ribosomal protein L2, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein L2 1.505e-07
C-terminus
sp_v3.0_unigene154613 SustainPine v3.0 165
• AutoFact: Ribosomal protein 27 (Fragment) n=1 Tax=Lonomia obliqua RepID=Q5MGK1_LONON 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 6.476e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain