Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37724 SustainPine v3.0 329
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 6.696e-21
Internal
sp_v3.0_unigene54163 SustainPine v3.0 155
AutoFact: 50S ribosomal protein L2 n=1 Tax=Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 RepID=D7GJ32_PROFC 3.0e-15
FL-Next: sp=50S ribosomal protein L2, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene54172 SustainPine v3.0 197
AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 8.985e-09
N-terminus
sp_v3.0_unigene54336 SustainPine v3.0 316
AutoFact: Mitochondrial processing peptidase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9RQC8_RICCO 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54513 SustainPine v3.0 459
AutoFact: 60S ribosomal protein L26 n=2 Tax=Sclerotiniaceae RepID=A6RXB8_BOTFB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene55407 SustainPine v3.0 342
AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q7Z0P7_CRAGI 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 9.259e-08
Internal
sp_v3.0_unigene56376 SustainPine v3.0 487
AutoFact: 60S ribosomal protein l17 n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XM07_GROCL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.379e-08
N-terminus
sp_v3.0_unigene56647 SustainPine v3.0 80
AutoFact: Ribosomal protein L2 (Fragment) n=3 Tax=Pinaceae RepID=Q14EM9_PSEMZ 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L2 4.232e-13
Internal
sp_v3.0_unigene56882 SustainPine v3.0 451
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pyrenophora RepID=B2VRY4_PYRTR 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene57082 SustainPine v3.0 345
AutoFact: Ribosomal protein L2 (Fragment) n=3 Tax=Pinaceae RepID=Q14EM9_PSEMZ 9.99995e-41
FL-Next: sp=50S ribosomal protein L2, chloroplastic; Pinus arizonica. Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein L2 9.824e-35
Internal
sp_v3.0_unigene57870 SustainPine v3.0 406
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pyrenophora RepID=B2VRY4_PYRTR 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene64669 SustainPine v3.0 150
AutoFact: Unassigned protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene65259 SustainPine v3.0 207
AutoFact: Ribosomal protein L15 family protein n=2 Tax=Arabidopsis RepID=D7MRW5_ARALL 1.0e-15
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene67625 SustainPine v3.0 252
AutoFact: 50S ribosomal protein L22-like n=2 Tax=Oryza sativa RepID=Q5ZDK4_ORYSJ 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68483 SustainPine v3.0 373
AutoFact: 50S ribosomal protein L1 [Arabidopsis thaliana] sp|Q9LY66.1|RK1_ARATH RecName: Full=50S ribosomal protein L1, chloroplastic; AltName: Full=CL1; Flags: Precursor emb|CAB87802.1| chloroplast ribosomal L1-like protein [Arabidopsis thaliana] gb|AAK96640.1| AT 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 3.92364e-44
C-terminus
sp_v3.0_unigene73148 SustainPine v3.0 304
AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pooideae RepID=C3VQ50_WHEAT 2.0e-25
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene73603 SustainPine v3.0 447
AutoFact: Putative ribosomal protein L26e n=1 Tax=Diaphorina citri RepID=Q0PY02_DIACI 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 5.245e-11
N-terminus
sp_v3.0_unigene74704 SustainPine v3.0 414
AutoFact: 50S ribosomal protein L14 n=4 Tax=Pleosporineae RepID=B2WH53_PYRTR 2.0e-36
FL-Next: sp=50S ribosomal protein L14, chloroplastic; Taiwania cryptomerioides. Plastid; Chloroplast. 0.0
Sma3: HUELLENLOS-like protein 2.745e-09
C-terminus
sp_v3.0_unigene76187 SustainPine v3.0 291
AutoFact: 60S ribosomal protein L26-1 n=3 Tax=Brassicaceae RepID=RL261_ARATH 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 5.135e-11
Putative C-terminus
sp_v3.0_unigene76324 SustainPine v3.0 203
AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain