Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene189293 SustainPine v3.0 636
• AutoFact: 60S ribosomal protein L17 n=1 Tax=Diaphorina citri RepID=RL17_DIACI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Complete
sp_v3.0_unigene191211 SustainPine v3.0 446
• AutoFact: PREDICTED: similar to mitochondrial ribosomal protein L15 n=1 Tax=Hydra magnipapillata RepID=UPI0001923F66 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191226 SustainPine v3.0 410
• AutoFact: 50S ribosomal protein L15 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=RL15_FLAJ1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191613 SustainPine v3.0 581
• AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative Complete
sp_v3.0_unigene191828 SustainPine v3.0 585
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative Complete
sp_v3.0_unigene191866 SustainPine v3.0 627
• AutoFact: Putative ribosomal protein L7e n=1 Tax=Maconellicoccus hirsutus RepID=A2I448_MACHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.259e-08
C-terminus
sp_v3.0_unigene191959 SustainPine v3.0 511
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7N5_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 4.565e-11
Internal
sp_v3.0_unigene192291 SustainPine v3.0 656
• AutoFact: 60S ribosomal protein L13a n=8 Tax=Ditrysia RepID=RL13A_CHOPR 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 1.119e-20
Putative Complete
sp_v3.0_unigene192525 SustainPine v3.0 637
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Ectocarpus siliculosus RepID=D7G6W9_ECTSI 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 8.229e-21
C-terminus
sp_v3.0_unigene192529 SustainPine v3.0 750
• AutoFact: 60S ribosomal protein L13a n=2 Tax=Aedes/Ochlerotatus group RepID=B8XVP4_OCHTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 3.02e-21
Complete
sp_v3.0_unigene192974 SustainPine v3.0 473
• AutoFact: Superoxide dismutase n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XK55_GROCL 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene193230 SustainPine v3.0 560
• AutoFact: 50S ribosomal protein L2 n=3 Tax=Alistipes RepID=D4IMJ4_9BACT 0.0
• FL-Next: sp=50S ribosomal protein L2, chloroplastic; Nageia nagi. Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L2, chloroplastic 0.0
Putative C-terminus
sp_v3.0_unigene193327 SustainPine v3.0 495
• AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Polysphondylium pallidum RepID=D3AVW2_POLPA 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Melastoma malabathricum. 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene193427 SustainPine v3.0 446
• AutoFact: Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|EE Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 4.273e-11
C-terminus
sp_v3.0_unigene193429 SustainPine v3.0 478
• AutoFact: PREDICTED: 60S ribosomal protein L7 n=1 Tax=Apis mellifera RepID=UPI00003C0F40 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 9.59e-11
Putative C-terminus
sp_v3.0_unigene193437 SustainPine v3.0 564
• AutoFact: 60S ribosomal protein L26, putative [Toxoplasma gondii ME49] gb|EEB00046.1| 60S ribosomal protein L26, putative [Toxoplasma gondii ME49] gb|EEE31773.1| 60S ribosomal protein L26, putative [Toxoplasma gondii VEG] 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.437e-11
Complete
sp_v3.0_unigene193592 SustainPine v3.0 615
• AutoFact: Ribosomal protein L7 isoform A n=2 Tax=Lysiphlebus testaceipes RepID=Q56FE6_LYSTE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.154e-07
N-terminus
sp_v3.0_unigene193613 SustainPine v3.0 457
• AutoFact: Ribosomal protein L13Ae n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UKH5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 5.029e-21
N-terminus
sp_v3.0_unigene198386 SustainPine v3.0 539
• AutoFact: Similar to 60S ribosomal protein L26 n=1 Tax=Leptosphaeria maculans RepID=E4ZLM9_LEPMC 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.437e-11
Putative Complete
sp_v3.0_unigene198442 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L7 n=4 Tax=Pleosporineae RepID=B2WF45_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 2.196e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain