Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 'de novo' pyrimidine base biosynthetic process

Term: GO:0006207  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1701 SustainPine v3.0 1417
AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase 6.105e-08
Complete
sp_v3.0_unigene2754 SustainPine v3.0 1902
AutoFact: [F] COG0167 Dihydroorotate dehydrogenase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4145 SustainPine v3.0 1877
AutoFact: Serine/threonine-protein kinase SRK2E n=6 Tax=rosids RepID=SRK2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase 4.861e-08
Complete
sp_v3.0_unigene4528 SustainPine v3.0 423
AutoFact: Serine/threonine-protein kinase SAPK10, putative n=1 Tax=Ricinus communis RepID=B9S8L1_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase 2.27e-07
Internal
sp_v3.0_unigene7414 SustainPine v3.0 1131
AutoFact: Homeodomain-like; Uridylate kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Uridylate kinase, putative 1.186e-08
C-terminus
sp_v3.0_unigene7877 SustainPine v3.0 1658
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
FL-Next: tr=Aspartate/glutamate/uridylate kinase family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Similarity to uridylate kinase 0.0
Complete
sp_v3.0_unigene8816 SustainPine v3.0 2320
AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting protein kinase 3 1.708e-09
Complete
sp_v3.0_unigene12344 SustainPine v3.0 449
AutoFact: aspartate/glutamate/uridylate kinase-like protein [Arabidopsis thaliana] gb|AAK53015.1|AF375431_1 AT3g10030/T22K18_15 [Arabidopsis thaliana] gb|AAM52230.1| AT3g10030/T22K18_15 [Arabidopsis thaliana] gb|AEE74851.1| aspartate/glutamate/uridylate kinase-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene18002 SustainPine v3.0 2335
AutoFact: UMP synthase [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UMP synthase 2.27e-21
Complete
sp_v3.0_unigene20217 SustainPine v3.0 496
AutoFact: Serine/threonine-protein kinase SAPK1, putative n=1 Tax=Ricinus communis RepID=B9T099_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase 3.861e-07
N-terminus
sp_v3.0_unigene21927 SustainPine v3.0 2248
AutoFact: dihydroorotate dehydrogenase [Arabidopsis thaliana] sp|P32746.2|PYRD_ARATH RecName: Full=Dihydroorotate dehydrogenase (quinone), mitochondrial; Short=DHOdehase; AltName: Full=Dihydroorotate oxidase; Flags: Precursor gb|AAN64025.1|AF454729_1 dihydroorotate 0.0
FL-Next: sp=Dihydroorotate dehydrogenase (quinone), mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dihydroorotate dehydrogenase 6.285e-21
Putative Complete
sp_v3.0_unigene25129 SustainPine v3.0 1720
AutoFact: Aspartate carbamoyltransferase 2, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9STZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34909 SustainPine v3.0 1933
AutoFact: UMP synthase [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UMP synthase 2.27e-21
Complete
sp_v3.0_unigene36073 SustainPine v3.0 809
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative dehydrogenase 3.189e-07
N-terminus
sp_v3.0_unigene60931 SustainPine v3.0 199
AutoFact: uridine monophosphate synthase [Zea mays] gb|AAF86339.1|AF277454_1 UMP synthase [Zea mays] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68962 SustainPine v3.0 276
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 9.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Uridylate kinase, putative 1.124e-08
Internal
sp_v3.0_unigene72942 SustainPine v3.0 177
AutoFact: Dihydroorotate dehydrogenase (quinone), mitochondrial n=3 Tax=Arabidopsis RepID=PYRD_ARATH 2.0e-17
FL-Next: sp=Dihydroorotate dehydrogenase (quinone), mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dihydroorotate dehydrogenase 1.735e-16
Internal
sp_v3.0_unigene74518 SustainPine v3.0 249
AutoFact: Serine/threonine-protein kinase SAPK6 n=11 Tax=Poaceae RepID=SAPK6_ORYSJ 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase 1.669e-07
Internal
sp_v3.0_unigene76751 SustainPine v3.0 224
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 6.0e-20
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Uridylate kinase, putative 1.093e-08
Internal
sp_v3.0_unigene77395 SustainPine v3.0 503
AutoFact: Serine/threonine-protein kinase SAPK10, putative n=1 Tax=Ricinus communis RepID=B9S8L1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Snf1-like ser/thr protein kinase 5.542e-07
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain