Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene670 SustainPine v3.0 3514
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene673 SustainPine v3.0 2648
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 0.0
• FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
• Sma3: Transcription factor, putative 8.596e-07
C-terminus
sp_v3.0_unigene675 SustainPine v3.0 2521
• AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Repressor, antagonist of e2f-dp complex 1.229e-08
Complete
sp_v3.0_unigene681 SustainPine v3.0 1639
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene704 SustainPine v3.0 2043
• AutoFact: No apical meristem (NAM) protein n=1 Tax=Medicago truncatula RepID=A2Q3I9_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene709 SustainPine v3.0 3272
• AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene740 SustainPine v3.0 3072
• AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
• FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Transcription factor viviparous 1 0.0
Complete
sp_v3.0_unigene754 SustainPine v3.0 1925
• AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fertilization-independent endosperm protein 2.907e-19
Complete
sp_v3.0_unigene768 SustainPine v3.0 863
• AutoFact: Development related ERF protein n=4 Tax=Oryza sativa RepID=Q0JB99_ORYSJ 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative Complete
sp_v3.0_unigene790 SustainPine v3.0 1244
• AutoFact: Auxin-responsive protein IAA9 n=13 Tax=Brassicaceae RepID=IAA9_ARATH 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene793 SustainPine v3.0 2087
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Sma3: BHLH transcription factor 1.896e-10
C-terminus
sp_v3.0_unigene806 SustainPine v3.0 2318
• AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 1.342e-12
Complete
sp_v3.0_unigene831 SustainPine v3.0 3335
• AutoFact: basic leucine zipper transcription factor-like protein [Arabidopsis thaliana] ref|NP_001031810.1| basic leucine zipper transcription factor-like protein [Arabidopsis thaliana] gb|AAN12977.1| unknown protein [Arabidopsis thaliana] gb|AEE86989.1| basic leuc 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor RF2b 3.759e-14
Complete
sp_v3.0_unigene878 SustainPine v3.0 1323
• AutoFact: DEMETER protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Repressor of silencing 1 6.505e-09
C-terminus
sp_v3.0_unigene881 SustainPine v3.0 1966
• AutoFact: KANADI-like transcription factor FEATHERED [Ipomoea nil] dbj|BAE73188.1| KANADI-like transcription factor FEATHERED [Ipomoea nil] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Myb-like DNA-binding domain, SHAQKYF class family protein 4.36e-09
C-terminus
sp_v3.0_unigene892 SustainPine v3.0 676
• AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 0.0
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene906 SustainPine v3.0 2486
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA transcription factor 25 8.65e-15
Complete
sp_v3.0_unigene907 SustainPine v3.0 1797
• AutoFact: bZIP transcription factor bZIP50 [Glycine max] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene964 SustainPine v3.0 2041
• AutoFact: DRE-binding protein DREB1 n=1 Tax=Cymbidium insigne RepID=A6YT27_9ASPA 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene969 SustainPine v3.0 2206
• AutoFact: Heat shock transcription factor (HSF) [Glycine max] 1.4013e-45
• FL-Next: sp=Heat stress transcription factor B-4d; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Heat shock factor protein, putative 4.809e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain