Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6914 SustainPine v3.0 1039
• AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
• FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: F-box family protein 0.0
N-terminus
sp_v3.0_unigene6968 SustainPine v3.0 2209
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.265e-18
C-terminus
sp_v3.0_unigene6971 SustainPine v3.0 2197
• AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA transcription factor, putative 2.573e-09
Complete
sp_v3.0_unigene7025 SustainPine v3.0 2758
• AutoFact: Serine/threonine protein kinase n=2 Tax=Prunus RepID=C4PKQ3_PRUPE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 1.778e-25
Complete
sp_v3.0_unigene7052 SustainPine v3.0 2333
• AutoFact: ATP-synt_B multi-domain protein 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 1.6e-34
Putative Complete
sp_v3.0_unigene7107 SustainPine v3.0 1975
• AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 7.0e-38
• FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: BZIP transcription factor 9.113e-17
Complete
sp_v3.0_unigene7145 SustainPine v3.0 1243
• AutoFact: CCT motif family protein [Arabidopsis thaliana] gb|AAK92829.1| unknown protein [Arabidopsis thaliana] gb|AAM14235.1| unknown protein [Arabidopsis thaliana] gb|AED92023.1| CCT motif family protein [Arabidopsis thaliana] 2.0e-20
• FL-Next: tr=Constans-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: CCT motif family protein, expressed 4.209e-07
Putative Complete
sp_v3.0_unigene7161 SustainPine v3.0 1836
• AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q0WP01.1|PTR9_ARATH RecName: Full=Probable peptide/nitrate transporter At1g22540 dbj|BAF01148.1| similar to peptide transporter [Arabidopsis thaliana] gb|ACE79042.1| At1g22540 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Oligopeptide transporter, putative 6.492e-23
C-terminus
sp_v3.0_unigene7164 SustainPine v3.0 2086
• AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone deacetylase 0.0
Complete
sp_v3.0_unigene7178 SustainPine v3.0 1269
• AutoFact: dehydration-responsive element-binding protein 3 [Arabidopsis thaliana] sp|Q9LYD3.1|DREB3_ARATH RecName: Full=Dehydration-responsive element-binding protein 3; AltName: Full=Protein TINY 2 emb|CAB87719.1| transcription factor like protein [Arabidopsis tha 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.809e-28
Complete
sp_v3.0_unigene7181 SustainPine v3.0 3077
• AutoFact: Ethylene insensitive 3 class transcription factor n=2 Tax=Pyreae RepID=D5L145_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene signal transcription factor 2.182e-15
Complete
sp_v3.0_unigene7230 SustainPine v3.0 1536
• AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7243 SustainPine v3.0 1981
• AutoFact: Auxin-responsive protein IAA7 n=1 Tax=Picea abies RepID=B2KZF8_PICAB 3.00004e-41
• FL-Next: sp=Auxin-responsive protein IAA16; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Aux/IAA protein 1.878e-13
Complete
sp_v3.0_unigene7251 SustainPine v3.0 2821
• AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 5.499e-15
Complete
sp_v3.0_unigene7293 SustainPine v3.0 1794
• AutoFact: DUF3598 domain containing protein 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene7322 SustainPine v3.0 941
• AutoFact: Class III HD-Zip protein HDZ35 (Fragment) n=1 Tax=Pinus taeda RepID=Q0Q417_PINTA 0.0
• FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.149e-14
C-terminus
sp_v3.0_unigene7388 SustainPine v3.0 1616
• AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 9.94922e-44
• FL-Next: tr=SHORT-ROOT-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: GRAS family transcription factor 1.008e-06
C-terminus
sp_v3.0_unigene7408 SustainPine v3.0 3201
• AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative anthocyanin transcriptional regulator 4.377e-31
Complete
sp_v3.0_unigene7440 SustainPine v3.0 1921
• AutoFact: Histidine kinase 1, 2, 3 plant, putative n=1 Tax=Ricinus communis RepID=B9T0D3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine kinase 1.525e-31
C-terminus
sp_v3.0_unigene7450 SustainPine v3.0 1330
• AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain