Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6592 SustainPine v3.0 571
• AutoFact: Unassigned protein 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene6614 SustainPine v3.0 1755
• AutoFact: Transcription factor bHLH62 n=1 Tax=Arabidopsis thaliana RepID=BH062_ARATH 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.22e-14
Complete
sp_v3.0_unigene6630 SustainPine v3.0 1344
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 1.0e-34
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus
sp_v3.0_unigene6652 SustainPine v3.0 3647
• AutoFact: mitogen-activated protein kinase [Medicago sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 2.631e-25
Complete
sp_v3.0_unigene6658 SustainPine v3.0 1157
• AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE2_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box transcription factor 0.0
Complete
sp_v3.0_unigene6666 SustainPine v3.0 3232
• AutoFact: ISWI chromatin remodeling complex ATPase ISW1, putative n=1 Tax=Ricinus communis RepID=B9S6I7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 super family 1.796e-12
Complete
sp_v3.0_unigene6683 SustainPine v3.0 850
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata 1.403e-34
C-terminus
sp_v3.0_unigene6693 SustainPine v3.0 1149
• AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6721 SustainPine v3.0 1083
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 1.0e-19
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene6723 SustainPine v3.0 1477
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-a response regulator 2.982e-30
Complete
sp_v3.0_unigene6743 SustainPine v3.0 1735
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA binding protein, putative 4.441e-06
Complete
sp_v3.0_unigene6808 SustainPine v3.0 2395
• AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine kinase 2.131e-31
Complete
sp_v3.0_unigene6818 SustainPine v3.0 1252
• AutoFact: AINTEGUMENTA-like protein n=1 Tax=Ginkgo biloba RepID=Q2Z2G4_GINBI 0.0
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 4.591e-27
N-terminus
sp_v3.0_unigene6824 SustainPine v3.0 2755
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 3.113e-18
Complete
sp_v3.0_unigene6834 SustainPine v3.0 3642
• AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III HD-Zip protein HDZ32 0.0
Complete
sp_v3.0_unigene6865 SustainPine v3.0 1569
• AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6866 SustainPine v3.0 2090
• AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
• FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: GRAS family transcription factor 3.862e-26
C-terminus
sp_v3.0_unigene6886 SustainPine v3.0 2437
• AutoFact: Putative BEL1-like protein (Fragment) n=1 Tax=Gnetum gnemon RepID=Q7XA57_GNEGN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bel1 homeotic protein, putative 1.036e-25
Putative Complete
sp_v3.0_unigene6887 SustainPine v3.0 2461
• AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 5.716e-07
C-terminus
sp_v3.0_unigene6901 SustainPine v3.0 3756
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 8.507e-28
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain