Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene206364 SustainPine v3.0 611
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 7.0e-40
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 2.943e-26
N-terminus
sp_v3.0_unigene206418 SustainPine v3.0 347
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 1.0e-24
• FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.691e-28
N-terminus
sp_v3.0_unigene206473 SustainPine v3.0 591
• AutoFact: rve domain containing protein 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.12e-30
Internal
sp_v3.0_unigene206578 SustainPine v3.0 446
• AutoFact: Putative MADS domain transcription factor GGM11 n=1 Tax=Gnetum gnemon RepID=Q9XGJ6_GNEGN 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.68e-19
N-terminus
sp_v3.0_unigene206587 SustainPine v3.0 963
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.132e-14
N-terminus
sp_v3.0_unigene206682 SustainPine v3.0 449
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L111_MALDO 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene-responsive transcription factor 1A 1.328e-08
Putative C-terminus
sp_v3.0_unigene206700 SustainPine v3.0 818
• AutoFact: Gly_rich multi-domain protein 7.0e-19
• Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.183e-17
coding
sp_v3.0_unigene206814 SustainPine v3.0 620
• AutoFact: TINY transcription factor n=1 Tax=Arachis hypogaea RepID=E4W7U9_ARAHY 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 3.691e-27
N-terminus
sp_v3.0_unigene207119 SustainPine v3.0 901
• AutoFact: rve domain containing protein 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.155e-12
Internal
sp_v3.0_unigene207188 SustainPine v3.0 595
• AutoFact: rve domain containing protein 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.336e-11
Internal
sp_v3.0_unigene207207 SustainPine v3.0 512
• AutoFact: rve domain containing protein 8.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.603e-09
Internal
sp_v3.0_unigene207218 SustainPine v3.0 378
• AutoFact: rve domain containing protein 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.437e-14
Internal
sp_v3.0_unigene207230 SustainPine v3.0 871
• AutoFact: Transcription elongation factor 1 homolog n=7 Tax=Poaceae RepID=ELOF1_ORYSJ 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription elongation factor 1 homolog 8.127e-10
Complete
sp_v3.0_unigene207325 SustainPine v3.0 451
• AutoFact: rve domain containing protein 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.039e-18
Internal
sp_v3.0_unigene207410 SustainPine v3.0 597
• AutoFact: OSJNBa0041A02.23 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XTQ1_ORYSJ 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene207416 SustainPine v3.0 414
• AutoFact: Transcription elongation factor 1 homolog n=7 Tax=Poaceae RepID=ELOF1_ORYSJ 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription elongation factor 1 homolog 9.277e-10
C-terminus
sp_v3.0_unigene207736 SustainPine v3.0 666
• AutoFact: R2R3-MYB transcription factor MYB20 (Fragment) n=1 Tax=Picea glauca RepID=C0JTD4_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 3.134e-24
Putative Complete
sp_v3.0_unigene207769 SustainPine v3.0 581
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 1.0e-13
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Cold shock domain protein 3 2.275e-08
C-terminus
sp_v3.0_unigene207810 SustainPine v3.0 498
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 3.0e-36
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 7.894e-10
Internal
sp_v3.0_unigene207834 SustainPine v3.0 471
• AutoFact: cold inducible histidine kinase 1 [Catharanthus roseus] 4.0e-14
• FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histidine kinase osmosensor protein 2.783e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain