Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene203277 SustainPine v3.0 427
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 6.513e-15
N-terminus
sp_v3.0_unigene203281 SustainPine v3.0 232
• AutoFact: R2R3-MYB transcription factor MYB14 n=1 Tax=Pinus taeda RepID=Q27IP2_PINTA 7.0e-36
• FL-Next: tr=R2R3-MYB transcription factor MYB14; Pinus taeda (Loblolly pine). 0.0
• Sma3: MYB transcription factor 3.744e-10
Internal
sp_v3.0_unigene203283 SustainPine v3.0 170
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 2.0e-22
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome 4.745e-10
Internal
sp_v3.0_unigene203337 SustainPine v3.0 687
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 8.42e-15
Internal
sp_v3.0_unigene203470 SustainPine v3.0 345
• AutoFact: transcription factor MYB82 [Arabidopsis thaliana] sp|Q9LTF7.1|MYB82_ARATH RecName: Full=Transcription factor MYB82; AltName: Full=Myb-related protein 82; Short=AtMYB82 dbj|BAA98078.1| MYB82 [Arabidopsis thaliana] gb|AAS10107.1| MYB transcription factor [A 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: R2R3 MYB transcription factor 3.058e-11
Putative Complete
sp_v3.0_unigene203494 SustainPine v3.0 347
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 5.644e-24
N-terminus
sp_v3.0_unigene203528 SustainPine v3.0 482
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene203659 SustainPine v3.0 394
• AutoFact: rve domain containing protein 9.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.913e-16
Internal
sp_v3.0_unigene203718 SustainPine v3.0 382
• AutoFact: WRKY-like DNA-binding protein [Oryza sativa] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene203747 SustainPine v3.0 474
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.131e-12
Internal
sp_v3.0_unigene203761 SustainPine v3.0 438
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 6.348e-08
Internal
sp_v3.0_unigene203796 SustainPine v3.0 389
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.317e-15
Internal
sp_v3.0_unigene203916 SustainPine v3.0 291
• AutoFact: Ethylene-responsive transcription factor ERF018 n=1 Tax=Arabidopsis thaliana RepID=ERF18_ARATH 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene204007 SustainPine v3.0 263
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PL93_POPTR 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.47e-26
Internal
sp_v3.0_unigene204254 SustainPine v3.0 250
• AutoFact: Myb-related protein Hv1 n=3 Tax=Triticeae RepID=MYB1_HORVU 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene204749 SustainPine v3.0 293
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-26
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene204812 SustainPine v3.0 335
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9FFM0_ARATH 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.432e-24
Internal
sp_v3.0_unigene204854 SustainPine v3.0 282
• AutoFact: Homeobox-leucine zipper protein HOX23 n=3 Tax=Oryza sativa RepID=HOX23_ORYSJ 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.154e-18
Internal
sp_v3.0_unigene205151 SustainPine v3.0 479
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.905e-10
Internal
sp_v3.0_unigene205190 SustainPine v3.0 584
• AutoFact: GK15001 gene product from transcript GK15001-RA 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.812e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain