Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene202087 SustainPine v3.0 531
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.0e-33
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 1.665e-25
N-terminus
sp_v3.0_unigene202187 SustainPine v3.0 491
• AutoFact: calmodulin-binding transcription activator 5 [Arabidopsis thaliana] sp|O23463.2|CMTA5_ARATH RecName: Full=Calmodulin-binding transcription activator 5; AltName: Full=Ethylene-induced calmodulin-binding protein f; Short=EICBP.f; AltName: Full=Signal-respon 9.0e-25
• FL-Next: Isoform 3 of Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 0.0
N-terminus
sp_v3.0_unigene202194 SustainPine v3.0 409
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 2.319e-07
Internal
sp_v3.0_unigene202330 SustainPine v3.0 894
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9IKF6_POPTR 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene202344 SustainPine v3.0 407
• AutoFact: Ara-5;GTP-binding protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42089_ARATH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.694e-14
N-terminus
sp_v3.0_unigene202381 SustainPine v3.0 776
• AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene202436 SustainPine v3.0 505
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene202464 SustainPine v3.0 837
• AutoFact: rve domain containing protein 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.588e-14
Putative N-terminus
sp_v3.0_unigene202516 SustainPine v3.0 897
• AutoFact: TINY transcription factor n=1 Tax=Arachis hypogaea RepID=E4W7U9_ARAHY 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 5.044e-21
Complete
sp_v3.0_unigene202526 SustainPine v3.0 482
• AutoFact: Heat stress transcription factor B-4b n=3 Tax=Oryza sativa RepID=HFB4B_ORYSJ 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 1.194e-18
Internal
sp_v3.0_unigene202559 SustainPine v3.0 546
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pol protein integrase region 0.0
Putative Complete
sp_v3.0_unigene202761 SustainPine v3.0 510
• AutoFact: Histone-like transcription factor n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N154_MICPC 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 3.16e-36
C-terminus
sp_v3.0_unigene202806 SustainPine v3.0 450
• AutoFact: Nuclear transcription factor Y subunit B-7 n=4 Tax=Arabidopsis RepID=NFYB7_ARATH 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CCAAT-box binding factor HAP3-like protein 6.812e-13
Putative N-terminus
sp_v3.0_unigene202876 SustainPine v3.0 589
• AutoFact: AP2 domain containing protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.956e-31
N-terminus
sp_v3.0_unigene202952 SustainPine v3.0 500
• AutoFact: Trypan_PARP multi-domain protein 3.0e-18
• Sma3: Proline-rich protein 7.889e-13
coding
sp_v3.0_unigene202972 SustainPine v3.0 487
• AutoFact: rve domain containing protein 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene203014 SustainPine v3.0 397
• AutoFact: Transcription factor WRKY15 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1V7_PHYPA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor 4 1.868e-07
Putative C-terminus
sp_v3.0_unigene203015 SustainPine v3.0 422
• AutoFact: Dehydration-responsive element-binding protein 1B n=1 Tax=Zea mays RepID=B6TYW5_MAIZE 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene203158 SustainPine v3.0 302
• AutoFact: Unassigned protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene203203 SustainPine v3.0 434
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain