Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene189712 SustainPine v3.0 367
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene189942 SustainPine v3.0 473
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MJX9_9ASPA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: G2-like myb-transcription factor with a n-terminal response regulator receiver domain 2.26e-08
Internal
sp_v3.0_unigene190190 SustainPine v3.0 397
• AutoFact: GRP multi-domain protein 2.0e-11
• Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene190436 SustainPine v3.0 553
• AutoFact: Proteasome subunit (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA9_GRIJA 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 1.042e-07
N-terminus
sp_v3.0_unigene190483 SustainPine v3.0 473
• AutoFact: Cold shock protein n=1 Tax=Bermanella marisrubri RepID=Q1N1Z0_9GAMM 7.0e-18
• FL-Next: tr=Cold shock domain containing proteins, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Glycine-rich protein 2b 2.893e-08
Complete
sp_v3.0_unigene190629 SustainPine v3.0 292
• AutoFact: Ras-related protein Rab-1B n=3 Tax=Dictyosteliida RepID=RAB1B_DICDI 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.506e-16
Internal
sp_v3.0_unigene190982 SustainPine v3.0 537
• AutoFact: AP2/ERF and B3 domain-containing protein Os01g0693400 n=1 Tax=Oryza sativa Japonica Group RepID=Y1934_ORYSJ 8.0e-35
• FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: AP2 domain-containing transcription factor 4.889e-10
Internal
sp_v3.0_unigene191353 SustainPine v3.0 497
• AutoFact: Nuclear transcription factor Y subunit A-7 n=3 Tax=Andropogoneae RepID=B6TY54_MAIZE 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit A-3 8.248e-17
Internal
sp_v3.0_unigene191603 SustainPine v3.0 425
• AutoFact: Proteasome subunit beta type n=5 Tax=Euteleostei RepID=B5X8Y8_SALSA 2.0e-19
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 6.012e-08
N-terminus
sp_v3.0_unigene191877 SustainPine v3.0 537
• AutoFact: HSF-type DNA-binding domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24HY0_TETTH 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein 7 3.722e-12
Internal
sp_v3.0_unigene191991 SustainPine v3.0 516
• AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 3.032e-12
C-terminus
sp_v3.0_unigene193457 SustainPine v3.0 842
• AutoFact: ras-related protein Rab-18-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001D3A15E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 3.776e-19
Complete
sp_v3.0_unigene193709 SustainPine v3.0 450
• AutoFact: Unassigned protein 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene193799 SustainPine v3.0 754
• AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 5.0e-11
• FL-Next: Isoform 2 of AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 0.0
• Sma3: AP2 domain-containing transcription factor 6.31e-07
N-terminus
sp_v3.0_unigene193856 SustainPine v3.0 486
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.2039e-45
Internal
sp_v3.0_unigene194238 SustainPine v3.0 200
• AutoFact: Transcription repressor MYB4 n=6 Tax=Brassicaceae RepID=MYB4_ARATH 2.0e-28
• FL-Next: tr=R2R3-MYB transcription factor MYB10; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 3.51e-15
Putative N-terminus
sp_v3.0_unigene194378 SustainPine v3.0 439
• AutoFact: BEL1-related homeotic protein 30 [Solanum tuberosum] 2.0e-40
• FL-Next: sp=BEL1-like homeodomain protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Bel1 homeotic protein, putative 7.773e-28
Internal
sp_v3.0_unigene194467 SustainPine v3.0 458
• AutoFact: putative basic-helix-loop-helix transcription factor [Oryza sativa Japonica Group] gb|EAZ24247.1| hypothetical protein OsJ_07997 [Oryza sativa Japonica Group] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene194757 SustainPine v3.0 331
• AutoFact: Unassigned protein
• FL-Next: sp=Histone-lysine N-methyltransferase EZ1; Zea mays (Maize). 0.0
• Sma3: SET domain protein 7.661e-07
Internal
sp_v3.0_unigene194804 SustainPine v3.0 400
• AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6STU1_MAIZE 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 8.01e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain