Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene186908 SustainPine v3.0 466
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187210 SustainPine v3.0 445
• AutoFact: MYB transcription factor MYB92 [Glycine max] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 3.356e-13
N-terminus
sp_v3.0_unigene187353 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal
sp_v3.0_unigene187446 SustainPine v3.0 185
• AutoFact: putative transcription factor [Arabidopsis thaliana] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 5.792e-08
Internal
sp_v3.0_unigene187536 SustainPine v3.0 359
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TINY-like protein 3.059e-26
Internal
sp_v3.0_unigene187556 SustainPine v3.0 476
• AutoFact: putative transcription factor [Cucumis sativus] 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene187668 SustainPine v3.0 151
• AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene187736 SustainPine v3.0 244
• AutoFact: R2R3 type Myb1 transcription factor n=1 Tax=Leucaena leucocephala RepID=F4YCA2_LEUGL 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Typical P-type R2R3 Myb protein 1.093e-07
Internal
sp_v3.0_unigene188401 SustainPine v3.0 411
• AutoFact: AP2 domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene188459 SustainPine v3.0 325
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.859e-23
Internal
sp_v3.0_unigene188606 SustainPine v3.0 614
• AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9RX62_RICCO 2.0e-18
• FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene188653 SustainPine v3.0 620
• AutoFact: pfam00046, Homeobox, Homeobox domain 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
C-terminus
sp_v3.0_unigene188680 SustainPine v3.0 247
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MTA7_POPTR 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 3.447e-39
N-terminus
sp_v3.0_unigene188781 SustainPine v3.0 904
• AutoFact: Trypan_PARP multi-domain protein 5.0e-17
• Sma3: Glycine-rich protein 4.645e-14
coding
sp_v3.0_unigene188797 SustainPine v3.0 1187
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z9_MALDO 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.604e-30
N-terminus
sp_v3.0_unigene189093 SustainPine v3.0 951
• AutoFact: rve domain containing protein 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene189127 SustainPine v3.0 787
• AutoFact: Ethylene-responsive element binding protein1 homolog n=1 Tax=Matricaria chamomilla RepID=Q9SST7_9ASTR 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene189216 SustainPine v3.0 1311
• AutoFact: plastidic phosphate translocator-like protein1 [Mesembryanthemum crystallinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 1.781e-10
Putative Complete
sp_v3.0_unigene189347 SustainPine v3.0 562
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T6Y2_RICCO 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 3.981e-39
N-terminus
sp_v3.0_unigene189515 SustainPine v3.0 691
• AutoFact: TPA_inf: WRKY transcription factor 59 [Oryza sativa (indica cultivar-group)] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Os05g0537100 protein 8.285e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain