Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene183900 SustainPine v3.0 325
• AutoFact: MYC transcription factor [Solanum tuberosum] 4.0e-34
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: DNA binding protein, putative 4.749e-08
Internal
sp_v3.0_unigene183950 SustainPine v3.0 1021
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.609e-09
N-terminus
sp_v3.0_unigene183974 SustainPine v3.0 333
• AutoFact: Similar to peptide transporter [Arabidopsis thaliana] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 8.927e-27
Internal
sp_v3.0_unigene183994 SustainPine v3.0 438
• AutoFact: Unassigned protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene184371 SustainPine v3.0 583
• AutoFact: Unassigned protein 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene184414 SustainPine v3.0 919
• AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 1.358e-23
Complete
sp_v3.0_unigene184502 SustainPine v3.0 668
• AutoFact: bZIP transcription factor bZIP124 [Glycine max] gb|ACU20693.1| unknown [Glycine max] 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene184546 SustainPine v3.0 583
• AutoFact: Cathepsin L2 n=1 Tax=Lubomirskia baicalensis RepID=Q1MTY5_9METZ 0.0
• FL-Next: tr=Pseudotzain; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Cysteine proteinase 0.0
Internal
sp_v3.0_unigene184580 SustainPine v3.0 520
• AutoFact: Wound-responsive AP2 like factor 1 n=1 Tax=Nicotiana tabacum RepID=A4F248_TOBAC 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.964e-34
Putative N-terminus
sp_v3.0_unigene185431 SustainPine v3.0 739
• AutoFact: bZIP transcription factor ATB2 [Glycine max] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ocs element-binding factor, putative 2.287e-07
Complete
sp_v3.0_unigene185631 SustainPine v3.0 467
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.164e-13
N-terminus
sp_v3.0_unigene186330 SustainPine v3.0 432
• AutoFact: Unassigned protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene186521 SustainPine v3.0 403
• AutoFact: cytochrome P450 [Pyrus communis] 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 6.863e-21
N-terminus
sp_v3.0_unigene186908 SustainPine v3.0 466
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187353 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal
sp_v3.0_unigene187536 SustainPine v3.0 359
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TINY-like protein 3.059e-26
Internal
sp_v3.0_unigene187556 SustainPine v3.0 476
• AutoFact: putative transcription factor [Cucumis sativus] 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene187668 SustainPine v3.0 151
• AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene188401 SustainPine v3.0 411
• AutoFact: AP2 domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene188459 SustainPine v3.0 325
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.859e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain