Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene162252 SustainPine v3.0 296
• AutoFact: polyprotein [Glycine max] 1.0e-19
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene162305 SustainPine v3.0 340
• AutoFact: Os07g0510800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0D652_ORYSJ 8.0e-17
• FL-Next: tr=Retrotransposon protein, putative, unclassified, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene162357 SustainPine v3.0 317
• AutoFact: transcription-factor-like protein [Boechera stricta] 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene162480 SustainPine v3.0 472
• AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 4.38396e-41
N-terminus
sp_v3.0_unigene162611 SustainPine v3.0 387
• AutoFact: rve domain containing protein 9.0e-12
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.839e-16
Internal
sp_v3.0_unigene162619 SustainPine v3.0 190
• AutoFact: Transcription factor WRKY-1 n=1 Tax=Coptis japonica var. dissecta RepID=A0ZT25_COPJA 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene162626 SustainPine v3.0 379
• AutoFact: WRKY35 transcription factor n=1 Tax=Brassica napus RepID=C4N1L4_BRANA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 3.235e-20
Putative C-terminus
sp_v3.0_unigene162681 SustainPine v3.0 377
• AutoFact: Unassigned protein 9.99995e-41
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.869e-15
Putative C-terminus
sp_v3.0_unigene162716 SustainPine v3.0 326
• AutoFact: Transcription factor WRKY15 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1V7_PHYPA 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene162729 SustainPine v3.0 367
• AutoFact: RVT_2 domain containing protein 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.061e-09
Putative N-terminus
sp_v3.0_unigene162735 SustainPine v3.0 373
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene162807 SustainPine v3.0 330
• AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RDW9_RICCO 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY69-superfamily of TFs having WRKY and zinc finger domains 1.175e-07
Putative C-terminus
sp_v3.0_unigene162975 SustainPine v3.0 291
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.716e-22
Internal
sp_v3.0_unigene162997 SustainPine v3.0 274
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 9.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene163018 SustainPine v3.0 305
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene163190 SustainPine v3.0 530
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 9.938e-08
Internal
sp_v3.0_unigene163234 SustainPine v3.0 295
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9H8L1_POPTR 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene163246 SustainPine v3.0 192
• AutoFact: AP2 domain-containing transcription factor 1 n=3 Tax=Glycine max RepID=C9WA59_SOYBN 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene163248 SustainPine v3.0 472
• AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TCP-domain protein 6.598e-14
Putative N-terminus
sp_v3.0_unigene163249 SustainPine v3.0 364
• AutoFact: basic helix-loop-helix (bHLH) family protein 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.049e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain