Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3809 SustainPine v3.0 1437
• AutoFact: homeodomain protein HB2 [Populus tomentosa] 0.0
• FL-Next: sp=WUSCHEL-related homeobox 8; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: WUSCHEL-related homeobox 14 3.401e-08
Complete
sp_v3.0_unigene3812 SustainPine v3.0 1428
• AutoFact: protein AGAMOUS-like 65 [Arabidopsis thaliana] gb|AAN37407.1| MADS-box protein AGL65 [Arabidopsis thaliana] gb|AEE29758.1| protein AGAMOUS-like 65 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative MADS-domain transcription factor 3.821e-06
Complete
sp_v3.0_unigene3875 SustainPine v3.0 2496
• AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9T452_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3884 SustainPine v3.0 1921
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3976 SustainPine v3.0 2520
• AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 3.514e-27
Complete
sp_v3.0_unigene4047 SustainPine v3.0 2394
• AutoFact: bZIP transcription factor bZIP50 [Glycine max] 0.0
• FL-Next: sp=Probable transcription factor PosF21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4059 SustainPine v3.0 2661
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4126 SustainPine v3.0 1157
• AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BZIP transcription factor 1.349e-14
C-terminus
sp_v3.0_unigene4134 SustainPine v3.0 1104
• AutoFact: Two-component sensor histidine kinase bacteria, putative n=1 Tax=Ricinus communis RepID=B9T4M7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.149e-32
Putative Complete
sp_v3.0_unigene4156 SustainPine v3.0 1979
• AutoFact: pfam00170, bZIP_1, bZIP transcription factor 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4164 SustainPine v3.0 1460
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9IJW7_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene4166 SustainPine v3.0 2860
• AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
• FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
• Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4227 SustainPine v3.0 2357
• AutoFact: octopine synthase binding factor3 [Zea mays] emb|CAA48904.1| ocs-element binding factor 3.2 [Zea mays] 0.0
• FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
• Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4287 SustainPine v3.0 937
• AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 1.066e-06
C-terminus
sp_v3.0_unigene4289 SustainPine v3.0 525
• AutoFact: Os02g0203000 protein n=2 Tax=Oryza sativa RepID=Q0E2Y8_ORYSJ 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor HY5 1.887e-18
Putative Complete
sp_v3.0_unigene4329 SustainPine v3.0 982
• AutoFact: MYB transcription factor MYB185 [Glycine max] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.656e-22
N-terminus
sp_v3.0_unigene4346 SustainPine v3.0 574
• AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene4351 SustainPine v3.0 460
• AutoFact: NAC transcription factor NAM-1 [Hordeum vulgare subsp. vulgare] gb|ABY67949.1| NAM-1 [Hordeum vulgare subsp. vulgare] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 1.961e-37
N-terminus
sp_v3.0_unigene4381 SustainPine v3.0 609
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene4407 SustainPine v3.0 153
• AutoFact: Dp_E2F-Like (IC) [Ostreococcus tauri] gb|AAV68606.1| DP-E2F-like protein [Ostreococcus tauri] emb|CAL55026.1| Dp_E2F-Like (IC) [Ostreococcus tauri] 1.0e-07
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain