Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31242 SustainPine v3.0 2223
• AutoFact: vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] gb|AEC09293.1| vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Vacuolar protein sorting-associated protein 72; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene31326 SustainPine v3.0 877
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Emb|CAB45066.1 8.985e-09
Complete
sp_v3.0_unigene31390 SustainPine v3.0 638
• AutoFact: Unassigned protein 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31425 SustainPine v3.0 941
• AutoFact: TINY transcription factor n=1 Tax=Arachis hypogaea RepID=E4W7U9_ARAHY 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 3.988e-07
Complete
sp_v3.0_unigene31458 SustainPine v3.0 741
• AutoFact: MIKCC MADS-domain protein PPMC5 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSQ1_PHYPA 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 8.79e-21
Putative Complete
sp_v3.0_unigene31579 SustainPine v3.0 584
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.551e-28
N-terminus
sp_v3.0_unigene31621 SustainPine v3.0 859
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 0.0
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene31622 SustainPine v3.0 516
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene31696 SustainPine v3.0 513
• AutoFact: Unassigned protein 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene31751 SustainPine v3.0 458
• AutoFact: Heat shock transcription factor (HSF) n=3 Tax=Glycine max RepID=Q00M68_SOYBN 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 5.952e-15
Internal
sp_v3.0_unigene31840 SustainPine v3.0 591
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9GXD3_POPTR 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative N-terminus
sp_v3.0_unigene31872 SustainPine v3.0 833
• AutoFact: pfam00847, AP2, AP2 domain 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 1.119e-24
Complete
sp_v3.0_unigene32029 SustainPine v3.0 475
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RADIALIS 6.655e-11
Putative Complete
sp_v3.0_unigene32033 SustainPine v3.0 2386
• AutoFact: putative Ap2 domain protein [Arabidopsis thaliana] 4.0e-19
• FL-Next: sp=Ethylene-responsive transcription factor CRF2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2 domain containing protein 1.304e-08
Complete
sp_v3.0_unigene32068 SustainPine v3.0 911
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2 domain transcription factor-like 6.264e-07
Complete
sp_v3.0_unigene32072 SustainPine v3.0 406
• AutoFact: Ethylene-responsive transcription factor ERF016 n=2 Tax=Arabidopsis RepID=ERF16_ARATH 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 3.808e-19
N-terminus
sp_v3.0_unigene32097 SustainPine v3.0 409
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.29813e-43
N-terminus
sp_v3.0_unigene32109 SustainPine v3.0 3020
• AutoFact: casein kinase I-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative casein kinase I 1.018e-29
Complete
sp_v3.0_unigene32115 SustainPine v3.0 767
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 9.99995e-41
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 1.353e-40
Putative N-terminus
sp_v3.0_unigene32211 SustainPine v3.0 1082
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
• FL-Next: tr=AT-hook DNA-binding protein; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
• Sma3: DNA-binding protein-like 1.414e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain