Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29812 SustainPine v3.0 848
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVQ8_9POAL 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene29912 SustainPine v3.0 1010
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger-homeodomain protein 1 5.372e-17
Complete
sp_v3.0_unigene29985 SustainPine v3.0 2518
• AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30163 SustainPine v3.0 960
• AutoFact: AP2 domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.206e-39
Complete
sp_v3.0_unigene30180 SustainPine v3.0 2580
• AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
• FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
• Sma3: Homeobox transcription factor KN2 0.0
Complete
sp_v3.0_unigene30191 SustainPine v3.0 849
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MU01_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene30279 SustainPine v3.0 558
• AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 7.425e-17
Internal
sp_v3.0_unigene30450 SustainPine v3.0 890
• AutoFact: mini zinc finger 1 [Arabidopsis thaliana] gb|AAG52375.1|AC011765_27 hypothetical protein; 104370-104062 [Arabidopsis thaliana] gb|ABD60689.1| At1g74660 [Arabidopsis thaliana] gb|AEE35619.1| mini zinc finger 1 [Arabidopsis thaliana] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger-homeodomain protein 1 1.404e-13
Putative Complete
sp_v3.0_unigene30489 SustainPine v3.0 1172
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 2.0e-17
• FL-Next: sp=Dehydration-responsive element-binding protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 7.495e-34
Complete
sp_v3.0_unigene30565 SustainPine v3.0 1019
• AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 6.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30570 SustainPine v3.0 1029
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L111_MALDO 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Putative Complete
sp_v3.0_unigene30630 SustainPine v3.0 968
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 5.60519e-45
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.052e-34
Putative Complete
sp_v3.0_unigene30653 SustainPine v3.0 884
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene30671 SustainPine v3.0 1079
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L123_MALDO 2.0e-27
• FL-Next: sp=Dehydration-responsive element-binding protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.84e-30
Complete
sp_v3.0_unigene30710 SustainPine v3.0 1070
• AutoFact: Transcription factor hy5, putative n=1 Tax=Ricinus communis RepID=B9RP68_RICCO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30713 SustainPine v3.0 875
• AutoFact: AP2 domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.163e-38
Putative Complete
sp_v3.0_unigene30936 SustainPine v3.0 4390
• AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene30948 SustainPine v3.0 1194
• AutoFact: Myosin_tail_1 domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31019 SustainPine v3.0 871
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 3.203e-19
Complete
sp_v3.0_unigene31128 SustainPine v3.0 373
• AutoFact: NAM-like protein [Prunus persica] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 4.2039e-45
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain