Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24196 SustainPine v3.0 1258
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 9.12e-31
Complete
sp_v3.0_unigene24226 SustainPine v3.0 652
AutoFact: MYB transcription factor n=3 Tax=Oryza sativa RepID=Q0D3F9_ORYSJ 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.535e-30
N-terminus
sp_v3.0_unigene24444 SustainPine v3.0 816
AutoFact: B-block binding subunit of TFIIIC [Arabidopsis thaliana] gb|AAK62783.1|AC027036_4 hypothetical protein [Arabidopsis thaliana] gb|AEE33578.1| B-block binding subunit of TFIIIC [Arabidopsis thaliana] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene24510 SustainPine v3.0 4728
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 3.169e-13
Complete
sp_v3.0_unigene24733 SustainPine v3.0 899
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MPF2-like 4.219e-15
C-terminus
sp_v3.0_unigene24801 SustainPine v3.0 312
AutoFact: Putative AP2 domain-containing transcription factor (Fragment) n=1 Tax=Musa acuminata RepID=B5RHW0_MUSAC 4.0e-15
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: AP2/ERF domain-containing transcription factor 8.294e-24
Internal
sp_v3.0_unigene24825 SustainPine v3.0 487
AutoFact: MADS-box transcription factor GbMADS1 n=1 Tax=Ginkgo biloba RepID=Q58A82_GINBI 1.0e-37
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box protein 5.248e-21
N-terminus
sp_v3.0_unigene24963 SustainPine v3.0 385
AutoFact: Ethylene-responsive transcription factor ERF017 n=2 Tax=Arabidopsis RepID=ERF17_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 5.95706e-41
N-terminus
sp_v3.0_unigene25054 SustainPine v3.0 852
AutoFact: transcription factor-like protein [Arabidopsis thaliana] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene25246 SustainPine v3.0 1608
AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 4.659e-19
C-terminus
sp_v3.0_unigene25256 SustainPine v3.0 1872
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 5.0e-40
FL-Next: sp=Nuclear transcription factor Y subunit A-7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 1.432e-16
Complete
sp_v3.0_unigene25535 SustainPine v3.0 1222
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
FL-Next: tr=MADS-box transcription factor; Cycas edentata. 0.0
Sma3: AGAMOUS-like protein 0.0
Complete
sp_v3.0_unigene25542 SustainPine v3.0 539
AutoFact: [D] COG0206 Cell division GTPase 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 1.369e-19
Putative N-terminus
sp_v3.0_unigene25555 SustainPine v3.0 1079
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 8.051e-27
Complete
sp_v3.0_unigene25572 SustainPine v3.0 555
AutoFact: MADS-box transcription factor TaAGL28 n=9 Tax=Pooideae RepID=Q1G180_WHEAT 1.0e-24
FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 2.644e-17
N-terminus
sp_v3.0_unigene26105 SustainPine v3.0 683
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene26111 SustainPine v3.0 624
AutoFact: Embryonic element binding Factor 8 (Fragment) n=1 Tax=Daucus carota RepID=A2V671_DAUCA 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene26306 SustainPine v3.0 630
AutoFact: WRKY transcription factor 5 [Solanum tuberosum] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 8.853e-20
Putative C-terminus
sp_v3.0_unigene26344 SustainPine v3.0 1295
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.60519e-45
FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
Sma3: MADS-box transcription factor 1.008e-23
Complete
sp_v3.0_unigene26590 SustainPine v3.0 1886
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 1.047e-18
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain