Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene22653 SustainPine v3.0 953
• AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative histone deacetylase complex, SIN3 component 5.176e-16
Putative Complete
sp_v3.0_unigene22655 SustainPine v3.0 864
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L117_MALDO 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.156e-34
Complete
sp_v3.0_unigene22865 SustainPine v3.0 828
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 2.87e-15
Putative Complete
sp_v3.0_unigene22925 SustainPine v3.0 756
• AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22977 SustainPine v3.0 454
• AutoFact: Unassigned protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene22983 SustainPine v3.0 1042
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23072 SustainPine v3.0 3115
• AutoFact: AP2-related transcription factor AP2L3 (Fragment) n=2 Tax=Picea RepID=Q106U2_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2-related transcription factor AP2L3 0.0
Complete
sp_v3.0_unigene23282 SustainPine v3.0 1172
• AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene-responsive transcription factor 4 2.344e-24
Complete
sp_v3.0_unigene23283 SustainPine v3.0 475
• AutoFact: transcription factor Myb [Capsicum annuum] 9.80909e-45
• FL-Next: tr=R2R3-MYB transcription factor MYB8; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 3.041e-16
N-terminus
sp_v3.0_unigene23340 SustainPine v3.0 880
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ESC, putative 2.932e-15
C-terminus
sp_v3.0_unigene23372 SustainPine v3.0 1245
• AutoFact: overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] gb|AAN72028.1| putative protein [Arabidopsis thaliana] gb|AAP42756.1| At5g11270 [Arabidopsis thaliana] gb|AED91654.1| overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23659 SustainPine v3.0 699
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 5.0e-28
• FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: DNA-binding protein 4.015e-09
Internal
sp_v3.0_unigene23781 SustainPine v3.0 671
• AutoFact: TPA_inf: WRKY transcription factor 7 [Oryza sativa (japonica cultivar-group)] gb|AAT39221.1| 'unknown protein, contains WRKY DNA -binding domain' [Oryza sativa Japonica Group] gb|ABC02807.1| WRKY transcription factor 7 [Oryza sativa] gb|EEE64508.1| hypoth 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 8.206e-08
Putative Complete
sp_v3.0_unigene23915 SustainPine v3.0 1046
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 0.0
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23988 SustainPine v3.0 2896
• AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene24011 SustainPine v3.0 1001
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAF01151.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28274.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 3.923e-09
Complete
sp_v3.0_unigene24073 SustainPine v3.0 773
• AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9SMY1_RICCO 1.0e-23
• FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: AGAMOUS-like protein 3.474e-21
N-terminus
sp_v3.0_unigene24118 SustainPine v3.0 721
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 8.0e-27
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.595e-07
Putative C-terminus
sp_v3.0_unigene24131 SustainPine v3.0 710
• AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.108e-31
C-terminus
sp_v3.0_unigene24142 SustainPine v3.0 2317
• AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain