Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18960 SustainPine v3.0 437
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L125_MALDO 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene19047 SustainPine v3.0 646
• AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
• FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Fruitful-like MADS-box transcription factor 5.361e-25
Putative C-terminus
sp_v3.0_unigene19202 SustainPine v3.0 1839
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 6.802e-16
Complete
sp_v3.0_unigene19205 SustainPine v3.0 163
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene19228 SustainPine v3.0 342
• AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene19258 SustainPine v3.0 1741
• AutoFact: MYBPA1 protein n=2 Tax=Vitis vinifera RepID=A4F4L3_VITVI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB-like DNA-binding domain protein 1.453e-08
Putative Complete
sp_v3.0_unigene19501 SustainPine v3.0 544
• AutoFact: Ethylene-responsive-element-binding factor 6 n=1 Tax=Petunia x hybrida RepID=E3VVR5_PETHY 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.3766e-42
N-terminus
sp_v3.0_unigene19666 SustainPine v3.0 435
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.651e-16
Internal
sp_v3.0_unigene19789 SustainPine v3.0 3867
• AutoFact: response regulator 8 [Zea mays] dbj|BAB41137.1| response regulator 8 [Zea mays] gb|ACG47663.1| two-component response regulator ARR1 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.486e-31
Putative Complete
sp_v3.0_unigene20043 SustainPine v3.0 1430
• AutoFact: Putative ABC transporter n=2 Tax=Malvoideae RepID=B2ZAR0_GOSRA 0.0
• FL-Next: sp=ABC transporter I family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytochrome c biogenesis ATP-binding export protein ccmA-like 3.564e-09
Complete
sp_v3.0_unigene20072 SustainPine v3.0 2881
• AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
• FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: F-box family protein 4.2039e-45
Putative Complete
sp_v3.0_unigene20130 SustainPine v3.0 1020
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor 5.462e-09
Putative C-terminus
sp_v3.0_unigene20143 SustainPine v3.0 2267
• AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
• FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Transcription factor E2F 9.041e-21
Complete
sp_v3.0_unigene20156 SustainPine v3.0 310
• AutoFact: Unassigned protein 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20205 SustainPine v3.0 1265
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 1.103e-16
Complete
sp_v3.0_unigene20354 SustainPine v3.0 1867
• AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 3.1277e-42
Complete
sp_v3.0_unigene20420 SustainPine v3.0 1935
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gb|AAM47474.1| AT4g00830/A_TM018A10 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Nucleolar phosphoprotein, putative 6.638e-13
Complete
sp_v3.0_unigene20499 SustainPine v3.0 1007
• AutoFact: Ethylene response factor 6 n=1 Tax=Actinidia deliciosa RepID=D8VD33_ACTDE 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.043e-26
N-terminus
sp_v3.0_unigene20511 SustainPine v3.0 829
• AutoFact: pfam00847, AP2, AP2 domain 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20568 SustainPine v3.0 691
• AutoFact: Ethylene-responsive transcription factor 1 n=1 Tax=Solanum lycopersicum RepID=ERF1_SOLLC 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 3.892e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain