Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16006 SustainPine v3.0 658
• AutoFact: AP2/ERF domain-containing transcription factor n=2 Tax=Populus trichocarpa RepID=A9PL78_POPTR 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.279e-27
C-terminus
sp_v3.0_unigene16014 SustainPine v3.0 614
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 6.764e-07
Putative Complete
sp_v3.0_unigene16102 SustainPine v3.0 1245
• AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BZIP transcription factor 7.415e-17
C-terminus
sp_v3.0_unigene16106 SustainPine v3.0 895
• AutoFact: pfam02362, B3, B3 DNA binding domain 3.0e-19
• FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
• Sma3: ABI3-like factor 2.56e-14
Putative C-terminus
sp_v3.0_unigene16127 SustainPine v3.0 736
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 2.431e-18
Putative Complete
sp_v3.0_unigene16172 SustainPine v3.0 410
• AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 2.0e-11
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 1.192e-38
Internal
sp_v3.0_unigene16254 SustainPine v3.0 632
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA1_POPTR 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16285 SustainPine v3.0 634
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dehydration responsive element binding protein 1.348e-14
Putative Complete
sp_v3.0_unigene16294 SustainPine v3.0 732
• AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.011e-22
C-terminus
sp_v3.0_unigene16410 SustainPine v3.0 379
• AutoFact: serine/threonine protein kinase isolog [Arabidopsis thaliana] gb|AAO30076.1| serine/threonine protein kinase isolog [Arabidopsis thaliana] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16414 SustainPine v3.0 595
• AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene16471 SustainPine v3.0 629
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 6.34e-28
C-terminus
sp_v3.0_unigene16509 SustainPine v3.0 890
• AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE0_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box transcription factor 0.0
Putative Complete
sp_v3.0_unigene16654 SustainPine v3.0 1055
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene16675 SustainPine v3.0 973
• AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S4T8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 1.994e-17
C-terminus
sp_v3.0_unigene16748 SustainPine v3.0 958
• AutoFact: homeobox-leucine zipper protein [Glycine max] 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.342e-10
N-terminus
sp_v3.0_unigene16862 SustainPine v3.0 2268
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor HBP-1a 4.014e-15
Complete
sp_v3.0_unigene16875 SustainPine v3.0 919
• AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 8.617e-33
Complete
sp_v3.0_unigene16898 SustainPine v3.0 1445
• AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.88667e-43
Complete
sp_v3.0_unigene16979 SustainPine v3.0 1672
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain