Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14948 SustainPine v3.0 2177
• AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 9.212e-13
C-terminus
sp_v3.0_unigene15030 SustainPine v3.0 545
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MPF2-like 2.966e-11
N-terminus
sp_v3.0_unigene15048 SustainPine v3.0 1169
• AutoFact: APETALA2-like protein 2 n=1 Tax=Pinus thunbergii RepID=Q76H94_PINTH 0.0
• FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: APETALA2-like protein 5.792e-14
C-terminus
sp_v3.0_unigene15050 SustainPine v3.0 1401
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] gb|ABF96565.1| CCAAT-box transcription factor complex WHAP3, putative, expressed [Oryza sativa Japonica Group] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit A-7 2.159e-08
N-terminus
sp_v3.0_unigene15114 SustainPine v3.0 211
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15431 SustainPine v3.0 316
• AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 5.0e-26
• FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: B-sister lineage-like protein BS 4.916e-10
C-terminus
sp_v3.0_unigene15454 SustainPine v3.0 797
• AutoFact: HB1 homeodomain protein [Populus tremula x Populus tremuloides] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr4 scaffold_205, whole genome shotgun sequence 2.384e-06
N-terminus
sp_v3.0_unigene15589 SustainPine v3.0 1022
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.036e-13
Complete
sp_v3.0_unigene15591 SustainPine v3.0 662
• AutoFact: NF-X1-type zinc finger protein NFXL1 [Arabidopsis thaliana] sp|Q9SY59.1|NFXL1_ARATH RecName: Full=NF-X1-type zinc finger protein NFXL1; Short=AtNFXL1 gb|AAD32867.1|AC005489_5 F14N23.5 [Arabidopsis thaliana] gb|AEE28549.1| NF-X1-type zinc finger protein NF 4.0e-39
• FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene15669 SustainPine v3.0 430
• AutoFact: R2R3-MYB transcription factor MYB2 [Picea glauca] 2.0e-22
• FL-Next: tr=R2R3-MYB transcription factor MYB2; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 1.363e-24
N-terminus
sp_v3.0_unigene15689 SustainPine v3.0 1100
• AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
• FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: DEF/GLO-like protein 0.0
Complete
sp_v3.0_unigene15715 SustainPine v3.0 562
• AutoFact: HSF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ32_MALDO 4.0e-10
• FL-Next: sp=Heat stress transcription factor B-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene15727 SustainPine v3.0 705
• AutoFact: homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana] sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 dbj|BAE99427.1| homeobox protein [Ara 4.0e-34
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Homeobox-leucine zipper protein ATHB-4 1.401e-16
Complete
sp_v3.0_unigene15752 SustainPine v3.0 472
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 7.932e-10
Internal
sp_v3.0_unigene15769 SustainPine v3.0 879
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: MYB transcription factor 2.378e-14
Complete
sp_v3.0_unigene15827 SustainPine v3.0 544
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.354e-14
Internal
sp_v3.0_unigene15839 SustainPine v3.0 1160
• AutoFact: putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAF14851.1|AC011664_33 putative helicase [Arabidopsis thaliana] gb|AEE73755.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: CarD-like transcriptional regulator family protein, expressed 4.755e-09
Putative N-terminus
sp_v3.0_unigene15851 SustainPine v3.0 631
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
• FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
• Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal
sp_v3.0_unigene15871 SustainPine v3.0 836
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger homeodomain protein 1 5.147e-21
Complete
sp_v3.0_unigene15940 SustainPine v3.0 1782
• AutoFact: homeobox transcription factor Hox7-like protein [Oryza sativa Japonica Group] dbj|BAC79878.1| homeobox transcription factor Hox7-like protein [Oryza sativa Japonica Group] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain