Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11907 SustainPine v3.0 2444
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene11921 SustainPine v3.0 1660
• AutoFact: Putative phosphate transporter n=1 Tax=Cryptomeria japonica RepID=Q1XG57_CRYJA 0.0
• FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: H(+)/Pi cotransporter 0.0
C-terminus
sp_v3.0_unigene11957 SustainPine v3.0 447
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.624e-33
Internal
sp_v3.0_unigene11978 SustainPine v3.0 485
• AutoFact: Ethylene-responsive transcription factor ERF016 n=2 Tax=Arabidopsis RepID=ERF16_ARATH 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene12107 SustainPine v3.0 2116
• AutoFact: DUF3816 multi-domain protein 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene12126 SustainPine v3.0 910
• AutoFact: Ethylene-responsive-element-binding factor 5 n=1 Tax=Petunia x hybrida RepID=E3VVR4_PETHY 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.089e-28
N-terminus
sp_v3.0_unigene12131 SustainPine v3.0 1458
• AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
• FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box protein 0.0
Complete
sp_v3.0_unigene12137 SustainPine v3.0 2134
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.023e-33
C-terminus
sp_v3.0_unigene12164 SustainPine v3.0 2064
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 2.402e-23
Complete
sp_v3.0_unigene12170 SustainPine v3.0 1182
• AutoFact: NAM-like protein [Arabidopsis thaliana] gb|AAN15611.1| NAM-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 1.287e-39
Complete
sp_v3.0_unigene12173 SustainPine v3.0 575
• AutoFact: ethylene-responsive transcription factor ERF073 [Arabidopsis thaliana] sp|Q8H0T5.1|ERF73_ARATH RecName: Full=Ethylene-responsive transcription factor ERF073 gb|AAN72074.1| putative AP2 domain transcription factor [Arabidopsis thaliana] gb|AAP13367.1| At1g 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene-responsive element binding protein 2 5.784e-10
N-terminus
sp_v3.0_unigene12228 SustainPine v3.0 1314
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene12291 SustainPine v3.0 1993
• AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9SU10_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor RF2b 3.66e-14
Putative Complete
sp_v3.0_unigene12301 SustainPine v3.0 866
• AutoFact: transcription factor TCP24 [Arabidopsis thaliana] ref|NP_849730.1| transcription factor TCP24 [Arabidopsis thaliana] sp|Q9C758.1|TCP24_ARATH RecName: Full=Transcription factor TCP24 gb|AAG50562.1|AC073506_4 hypothetical protein [Arabidopsis thaliana] gb|A 4.0e-25
• FL-Next: sp=Transcription factor TCP24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DICHOTOMA-like protein 3.888e-23
N-terminus
sp_v3.0_unigene12306 SustainPine v3.0 1178
• AutoFact: MADS-box transcription factor GbMADS9 n=1 Tax=Ginkgo biloba RepID=Q58A74_GINBI 0.0
• FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: PISTILLATA-like protein 4.414e-11
Complete
sp_v3.0_unigene12324 SustainPine v3.0 4347
• AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene12429 SustainPine v3.0 1046
• AutoFact: putative WRKY transcription factor 30 [Vitis aestivalis] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY74-superfamily of TFs having WRKY and zinc finger domains 7.757e-08
C-terminus
sp_v3.0_unigene12435 SustainPine v3.0 996
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L140_MALDO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 8.545e-16
Complete
sp_v3.0_unigene12595 SustainPine v3.0 1021
• AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12600 SustainPine v3.0 603
• AutoFact: Homeobox transcription factor KN1 n=3 Tax=Pinaceae RepID=Q5SC65_PINTA 0.0
• FL-Next: tr=Homeobox transcription factor KN1; Pinus taeda (Loblolly pine). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain