Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10209 SustainPine v3.0 625
• AutoFact: Homeodomain protein n=1 Tax=Malus x domestica RepID=Q9M7S0_MALDO 3.0e-23
• FL-Next: sp=BEL1-like homeodomain protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Homeodomain protein JUBEL1 1.411e-09
Internal
sp_v3.0_unigene10275 SustainPine v3.0 1511
• AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyoxalase II 1.96e-11
Putative Complete
sp_v3.0_unigene10281 SustainPine v3.0 642
• AutoFact: Ethylene-responsive transcription factor RAP2-3 n=2 Tax=Arabidopsis RepID=RAP23_ARATH 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.004e-24
N-terminus
sp_v3.0_unigene10345 SustainPine v3.0 2075
• AutoFact: Type B response regulator n=2 Tax=Selaginella moellendorffii RepID=D8SC74_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 3.849e-32
Complete
sp_v3.0_unigene10347 SustainPine v3.0 1287
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 1.0e-22
• FL-Next: sp=Probable WRKY transcription factor 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene10348 SustainPine v3.0 1543
• AutoFact: type-B response regulator [Catharanthus roseus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.641e-39
N-terminus
sp_v3.0_unigene10505 SustainPine v3.0 747
• AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q9M1I2.1|PTR46_ARATH RecName: Full=Probable peptide/nitrate transporter At3g54450 emb|CAB77565.1| oligopeptide transporter-like protein [Arabidopsis thaliana] gb|AEE79233.1| putative peptide/n 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.7e-26
Internal
sp_v3.0_unigene10507 SustainPine v3.0 1630
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA zinc finger family protein 8.989e-14
Complete
sp_v3.0_unigene10618 SustainPine v3.0 1714
• AutoFact: myb domain protein 20 [Arabidopsis thaliana] gb|AAG51765.1|AC066691_5 myb-related transcription factor, putative; 17635-18559 [Arabidopsis thaliana] gb|AAS10035.1| MYB transcription factor [Arabidopsis thaliana] gb|ABI49451.1| At1g66230 [Arabidopsis thali 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: MYB transcription factor 5.191e-40
Complete
sp_v3.0_unigene10632 SustainPine v3.0 2262
• AutoFact: O-FucT domain containing protein 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene10678 SustainPine v3.0 3714
• AutoFact: BEL1-like homeodomain transcription factor [Trifolium pratense] 0.0
• FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
• Sma3: Associated with HOX family protein, expressed 2.045e-18
Complete
sp_v3.0_unigene10685 SustainPine v3.0 930
• AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 7.494e-23
Complete
sp_v3.0_unigene10748 SustainPine v3.0 1220
• AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box transcription factor 0.0
Complete
sp_v3.0_unigene10814 SustainPine v3.0 921
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U432_PHYPA 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger-homeodomain protein 1 3.075e-18
C-terminus
sp_v3.0_unigene10826 SustainPine v3.0 441
• AutoFact: Ethylene-responsive transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S948_RICCO 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr16 scaffold_10, whole genome shotgun sequence 1.061e-28
Putative C-terminus
sp_v3.0_unigene10857 SustainPine v3.0 768
• AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene10869 SustainPine v3.0 801
• AutoFact: 1-acylglycerone phosphate reductase [Arabidopsis thaliana] gb|ABG48400.1| At5g10050 [Arabidopsis thaliana] gb|AED91487.1| 1-acylglycerone phosphate reductase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Short-chain dehydrogenase, putative 4.333e-06
Putative N-terminus
sp_v3.0_unigene10872 SustainPine v3.0 762
• AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TINY-like protein 4.48e-27
C-terminus
sp_v3.0_unigene10881 SustainPine v3.0 1892
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• FL-Next: sp=Homeobox-leucine zipper protein HOX20; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Homeobox protein, putative 1.639e-16
Complete
sp_v3.0_unigene11005 SustainPine v3.0 902
• AutoFact: Peptide transporter PTR2-B n=2 Tax=Zea mays RepID=B6SWT0_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 9.246e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain