Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11724 SustainPine v3.0 911
• AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11822 SustainPine v3.0 1342
• AutoFact: [K] COG1813 Predicted transcription factor, homolog of eukaryotic MBF1 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11888 SustainPine v3.0 1394
• AutoFact: CCAAT-box binding factor HAP5 homolog [Daucus carota] 0.0
• FL-Next: tr=HAP5B; Picea wilsonii. 0.0
• Sma3: HAP5B 0.0
Complete
sp_v3.0_unigene11925 SustainPine v3.0 375
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Repressor protein 4.391e-11
Putative C-terminus
sp_v3.0_unigene11957 SustainPine v3.0 447
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.624e-33
Internal
sp_v3.0_unigene12131 SustainPine v3.0 1458
• AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
• FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box protein 0.0
Complete
sp_v3.0_unigene12137 SustainPine v3.0 2134
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.023e-33
C-terminus
sp_v3.0_unigene12228 SustainPine v3.0 1314
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene12272 SustainPine v3.0 927
• AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 1.0e-36
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene12291 SustainPine v3.0 1993
• AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9SU10_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor RF2b 3.66e-14
Putative Complete
sp_v3.0_unigene12306 SustainPine v3.0 1178
• AutoFact: MADS-box transcription factor GbMADS9 n=1 Tax=Ginkgo biloba RepID=Q58A74_GINBI 0.0
• FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: PISTILLATA-like protein 4.414e-11
Complete
sp_v3.0_unigene12429 SustainPine v3.0 1046
• AutoFact: putative WRKY transcription factor 30 [Vitis aestivalis] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY74-superfamily of TFs having WRKY and zinc finger domains 7.757e-08
C-terminus
sp_v3.0_unigene12466 SustainPine v3.0 762
• AutoFact: putative Mlo (pathogen resistance) protein [Oryza sativa Japonica Group] gb|EEE51332.1| hypothetical protein OsJ_32315 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein MLO, putative 3.598e-28
Putative C-terminus
sp_v3.0_unigene12595 SustainPine v3.0 1021
• AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12600 SustainPine v3.0 603
• AutoFact: Homeobox transcription factor KN1 n=3 Tax=Pinaceae RepID=Q5SC65_PINTA 0.0
• FL-Next: tr=Homeobox transcription factor KN1; Pinus taeda (Loblolly pine). 0.0
N-terminus
sp_v3.0_unigene12641 SustainPine v3.0 1026
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12747 SustainPine v3.0 1041
• AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
• FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene12776 SustainPine v3.0 733
• AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 6.606e-08
C-terminus
sp_v3.0_unigene12823 SustainPine v3.0 2180
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene12862 SustainPine v3.0 907
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.401e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain