Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10209 SustainPine v3.0 625
AutoFact: Homeodomain protein n=1 Tax=Malus x domestica RepID=Q9M7S0_MALDO 3.0e-23
FL-Next: sp=BEL1-like homeodomain protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Homeodomain protein JUBEL1 1.411e-09
Internal
sp_v3.0_unigene10275 SustainPine v3.0 1511
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyoxalase II 1.96e-11
Putative Complete
sp_v3.0_unigene10286 SustainPine v3.0 1757
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10347 SustainPine v3.0 1287
AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 1.0e-22
FL-Next: sp=Probable WRKY transcription factor 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene10381 SustainPine v3.0 1404
AutoFact: translin-like protein [Arabidopsis thaliana] dbj|BAC41849.1| unknown protein [Arabidopsis thaliana] gb|ABD19690.1| At2g03780 [Arabidopsis thaliana] gb|AEC05748.1| translin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10505 SustainPine v3.0 747
AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q9M1I2.1|PTR46_ARATH RecName: Full=Probable peptide/nitrate transporter At3g54450 emb|CAB77565.1| oligopeptide transporter-like protein [Arabidopsis thaliana] gb|AEE79233.1| putative peptide/n 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.7e-26
Internal
sp_v3.0_unigene10507 SustainPine v3.0 1630
AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 8.989e-14
Complete
sp_v3.0_unigene10678 SustainPine v3.0 3714
AutoFact: BEL1-like homeodomain transcription factor [Trifolium pratense] 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Associated with HOX family protein, expressed 2.045e-18
Complete
sp_v3.0_unigene10748 SustainPine v3.0 1220
AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 0.0
Complete
sp_v3.0_unigene10814 SustainPine v3.0 921
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U432_PHYPA 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger-homeodomain protein 1 3.075e-18
C-terminus
sp_v3.0_unigene10857 SustainPine v3.0 768
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene10881 SustainPine v3.0 1892
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
FL-Next: sp=Homeobox-leucine zipper protein HOX20; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Homeobox protein, putative 1.639e-16
Complete
sp_v3.0_unigene11005 SustainPine v3.0 902
AutoFact: Peptide transporter PTR2-B n=2 Tax=Zea mays RepID=B6SWT0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 9.246e-29
C-terminus
sp_v3.0_unigene11016 SustainPine v3.0 1567
AutoFact: Peptidase_U4 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene11202 SustainPine v3.0 1407
AutoFact: histone-lysine N-methyltransferase CLF [Arabidopsis thaliana] sp|P93831.2|CLF_ARATH RecName: Full=Histone-lysine N-methyltransferase CLF; AltName: Full=Polycomb group protein CURLY LEAF; AltName: Full=Protein INCURVATA 1; AltName: Full=Protein SET DOMAIN 0.0
FL-Next: sp=Histone-lysine N-methyltransferase CLF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 7.566e-11
C-terminus
sp_v3.0_unigene11211 SustainPine v3.0 1889
AutoFact: nuclear transcription factor Y subunit C-1 [Arabidopsis thaliana] sp|Q9SMP0.1|NFYC1_ARATH RecName: Full=Nuclear transcription factor Y subunit C-1; Short=AtNF-YC-1; AltName: Full=Transcriptional activator HAP5A emb|CAB62348.1| transcription factor Hap5a [ 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccaat-binding transcription factor, putative 4.822e-26
Complete
sp_v3.0_unigene11396 SustainPine v3.0 2142
AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene11423 SustainPine v3.0 1770
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 4.797e-13
C-terminus
sp_v3.0_unigene11457 SustainPine v3.0 1148
AutoFact: putative WRKY transcription factor 69 [Arabidopsis thaliana] sp|Q93WV5.1|WRK69_ARATH RecName: Full=Probable WRKY transcription factor 69; AltName: Full=WRKY DNA-binding protein 69 gb|AAL13045.1|AF421156_1 WRKY transcription factor 69 [Arabidopsis thaliana 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 2.552e-09
Putative N-terminus
sp_v3.0_unigene11582 SustainPine v3.0 1184
AutoFact: MADS-box family transcription factor n=2 Tax=Pinus RepID=P93468_PINRE 0.0
FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Putative MADS-box family transcription factor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain