Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8805 SustainPine v3.0 490
AutoFact: Class III homeodomain-leucine zipper n=2 Tax=Psilotum nudum RepID=Q1WD31_PSINU 3.0e-11
FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Class III homeodomain-leucine zipper 9.791e-27
N-terminus
sp_v3.0_unigene8807 SustainPine v3.0 1516
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 4.0e-11
FL-Next: sp=GATA transcription factor 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: GATA transcription factor 19 3.279e-09
Complete
sp_v3.0_unigene8847 SustainPine v3.0 1224
AutoFact: MADS-domain protein DAL10 n=1 Tax=Picea abies RepID=Q71UQ7_PICAB 0.0
FL-Next: tr=MADS-domain protein DAL10; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-domain protein DAL10 0.0
Complete
sp_v3.0_unigene8881 SustainPine v3.0 1880
AutoFact: Ubiquitin carboxyl-terminal hydrolase 12 n=8 Tax=Brassicaceae RepID=UBP12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 4.139e-09
Complete
sp_v3.0_unigene8979 SustainPine v3.0 1588
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.27e-19
Complete
sp_v3.0_unigene9046 SustainPine v3.0 2799
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
FL-Next: sp=Homeobox-leucine zipper protein HDG2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Homeobox protein, putative 9.594e-18
Complete
sp_v3.0_unigene9085 SustainPine v3.0 825
AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock factor protein, putative 2.359e-18
Putative N-terminus
sp_v3.0_unigene9140 SustainPine v3.0 1548
AutoFact: homeobox-leucine zipper protein [Pimpinella brachycarpa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 8.989e-17
Complete
sp_v3.0_unigene9175 SustainPine v3.0 2703
AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 0.0
FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene9219 SustainPine v3.0 1851
AutoFact: Heat shock factor protein 7 n=1 Tax=Zea mays RepID=B6TJ68_MAIZE 0.0
FL-Next: sp=Heat shock factor protein HSF24; Solanum peruvianum (Peruvian tomato) (Lycopersicon peruvianum). 0.0
Sma3: Heat shock factor 1.854e-12
Complete
sp_v3.0_unigene9492 SustainPine v3.0 242
AutoFact: putative chloroplast SRP receptor cpFtsY precursor [Oryza sativa Japonica Group] dbj|BAG86738.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC72197.1| hypothetical protein OsI_05275 [Oryza sativa Indica Group] gb|EEE56037.1| hypothetical pr 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9670 SustainPine v3.0 463
AutoFact: Transcription factor HBP-1b(C1), putative n=1 Tax=Ricinus communis RepID=B9T2C4_RICCO 0.0
FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BZIP transcription factor 3.967e-22
Internal
sp_v3.0_unigene9805 SustainPine v3.0 1999
AutoFact: bZIP_2 domain containing protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene9846 SustainPine v3.0 1378
AutoFact: pfam00854, PTR2, POT family 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 1.164e-19
C-terminus
sp_v3.0_unigene9860 SustainPine v3.0 1583
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein MLO, putative 1.247e-16
C-terminus
sp_v3.0_unigene10082 SustainPine v3.0 1598
AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10136 SustainPine v3.0 1676
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccaat-binding transcription factor, putative 3.722e-26
Complete
sp_v3.0_unigene10188 SustainPine v3.0 2096
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I MADS-box transcription factor 4.873e-06
Putative Complete
sp_v3.0_unigene10189 SustainPine v3.0 542
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.312e-21
N-terminus
sp_v3.0_unigene10196 SustainPine v3.0 1950
AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock factor protein, putative 4.734e-19
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain