Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6424 SustainPine v3.0 1758
AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
FL-Next: sp=Light-inducible protein CPRF2; Petroselinum crispum (Parsley) (Petroselinum hortense). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6444 SustainPine v3.0 1353
AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class 1 knox protein 9.612e-15
C-terminus
sp_v3.0_unigene6592 SustainPine v3.0 571
AutoFact: Unassigned protein 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene6630 SustainPine v3.0 1344
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 1.0e-34
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus
sp_v3.0_unigene6658 SustainPine v3.0 1157
AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE2_PICAB 0.0
FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 0.0
Complete
sp_v3.0_unigene6693 SustainPine v3.0 1149
AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6721 SustainPine v3.0 1083
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 1.0e-19
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene6834 SustainPine v3.0 3642
AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
Sma3: Class III HD-Zip protein HDZ32 0.0
Complete
sp_v3.0_unigene6865 SustainPine v3.0 1569
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6886 SustainPine v3.0 2437
AutoFact: Putative BEL1-like protein (Fragment) n=1 Tax=Gnetum gnemon RepID=Q7XA57_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bel1 homeotic protein, putative 1.036e-25
Putative Complete
sp_v3.0_unigene6887 SustainPine v3.0 2461
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.716e-07
C-terminus
sp_v3.0_unigene6968 SustainPine v3.0 2209
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: GRAS family transcription factor 1.265e-18
C-terminus
sp_v3.0_unigene6971 SustainPine v3.0 2197
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor, putative 2.573e-09
Complete
sp_v3.0_unigene7076 SustainPine v3.0 1149
AutoFact: DNA polymerase I n=3 Tax=Andropogoneae RepID=B4FJZ1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene7107 SustainPine v3.0 1975
AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 7.0e-38
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BZIP transcription factor 9.113e-17
Complete
sp_v3.0_unigene7161 SustainPine v3.0 1836
AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q0WP01.1|PTR9_ARATH RecName: Full=Probable peptide/nitrate transporter At1g22540 dbj|BAF01148.1| similar to peptide transporter [Arabidopsis thaliana] gb|ACE79042.1| At1g22540 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Oligopeptide transporter, putative 6.492e-23
C-terminus
sp_v3.0_unigene7230 SustainPine v3.0 1536
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7293 SustainPine v3.0 1794
AutoFact: DUF3598 domain containing protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene7322 SustainPine v3.0 941
AutoFact: Class III HD-Zip protein HDZ35 (Fragment) n=1 Tax=Pinus taeda RepID=Q0Q417_PINTA 0.0
FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.149e-14
C-terminus
sp_v3.0_unigene7546 SustainPine v3.0 1684
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain