Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene202806 SustainPine v3.0 450
• AutoFact: Nuclear transcription factor Y subunit B-7 n=4 Tax=Arabidopsis RepID=NFYB7_ARATH 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CCAAT-box binding factor HAP3-like protein 6.812e-13
Putative N-terminus
sp_v3.0_unigene202952 SustainPine v3.0 500
• AutoFact: Trypan_PARP multi-domain protein 3.0e-18
• Sma3: Proline-rich protein 7.889e-13
coding
sp_v3.0_unigene203014 SustainPine v3.0 397
• AutoFact: Transcription factor WRKY15 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1V7_PHYPA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor 4 1.868e-07
Putative C-terminus
sp_v3.0_unigene203158 SustainPine v3.0 302
• AutoFact: Unassigned protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene203203 SustainPine v3.0 434
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene203718 SustainPine v3.0 382
• AutoFact: WRKY-like DNA-binding protein [Oryza sativa] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene204749 SustainPine v3.0 293
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-26
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene204854 SustainPine v3.0 282
• AutoFact: Homeobox-leucine zipper protein HOX23 n=3 Tax=Oryza sativa RepID=HOX23_ORYSJ 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.154e-18
Internal
sp_v3.0_unigene205277 SustainPine v3.0 394
• AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 2.564e-11
Putative C-terminus
sp_v3.0_unigene205307 SustainPine v3.0 507
• AutoFact: Putative MADS domain transcription factor GGM3 n=1 Tax=Gnetum gnemon RepID=Q9XGK4_GNEGN 8.0e-31
• FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: AGAMOUS-like protein 1.614e-33
N-terminus
sp_v3.0_unigene205825 SustainPine v3.0 367
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 3.0e-23
• FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: MADS-box protein 3.748e-25
N-terminus
sp_v3.0_unigene205870 SustainPine v3.0 513
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 8.00001e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.802e-25
Putative N-terminus
sp_v3.0_unigene206314 SustainPine v3.0 818
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.041e-19
Putative Complete
sp_v3.0_unigene206364 SustainPine v3.0 611
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 7.0e-40
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 2.943e-26
N-terminus
sp_v3.0_unigene206418 SustainPine v3.0 347
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 1.0e-24
• FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.691e-28
N-terminus
sp_v3.0_unigene206578 SustainPine v3.0 446
• AutoFact: Putative MADS domain transcription factor GGM11 n=1 Tax=Gnetum gnemon RepID=Q9XGJ6_GNEGN 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.68e-19
N-terminus
sp_v3.0_unigene207410 SustainPine v3.0 597
• AutoFact: OSJNBa0041A02.23 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XTQ1_ORYSJ 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene208444 SustainPine v3.0 485
• AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208583 SustainPine v3.0 664
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene208596 SustainPine v3.0 394
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.12e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain