Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165850 SustainPine v3.0 232
AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 1.0e-09
FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ2 1.276e-12
Internal
sp_v3.0_unigene166266 SustainPine v3.0 458
AutoFact: MADS-box transcription factor 50 n=2 Tax=Oryza sativa Japonica Group RepID=MAD50_ORYSJ 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene166451 SustainPine v3.0 388
AutoFact: RAD-like 6 protein [Arabidopsis thaliana] gb|ABD24442.1| RAD-like protein 6 [Arabidopsis thaliana] gb|AEE35694.1| RAD-like 6 protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative myb-related protein 1.411e-07
N-terminus
sp_v3.0_unigene166464 SustainPine v3.0 266
AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 2.523e-11
Internal
sp_v3.0_unigene166743 SustainPine v3.0 258
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SU72_RICCO 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 2.846e-10
N-terminus
sp_v3.0_unigene166748 SustainPine v3.0 366
AutoFact: Homeobox protein HAT3.1, putative n=1 Tax=Ricinus communis RepID=B9SN98_RICCO 8.0e-32
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal
sp_v3.0_unigene166823 SustainPine v3.0 335
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 5.99756e-43
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 2.217e-08
Internal
sp_v3.0_unigene166835 SustainPine v3.0 302
AutoFact: Isoform 2 of MADS-box transcription factor 13 n=1 Tax=Oryza sativa Japonica Group RepID=Q2QW53-2 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 1.935e-10
N-terminus
sp_v3.0_unigene167011 SustainPine v3.0 353
AutoFact: MADS-box protein 5 [Solanum lycopersicum] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.244e-13
N-terminus
sp_v3.0_unigene167360 SustainPine v3.0 102
AutoFact: TPA_inf: WRKY transcription factor 29 [Oryza sativa (japonica cultivar-group)] gb|EAZ02533.1| hypothetical protein OsI_24642 [Oryza sativa Indica Group] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 8.272e-08
Internal
sp_v3.0_unigene167396 SustainPine v3.0 307
AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 4.983e-17
Internal
sp_v3.0_unigene167532 SustainPine v3.0 227
AutoFact: WRKY transcription factor PmWRKY117 (Fragment) n=1 Tax=Pinus monticola RepID=E6Y3E9_PINMO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 8.999e-17
Internal
sp_v3.0_unigene167669 SustainPine v3.0 175
AutoFact: putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [ 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 1.451e-11
Putative N-terminus
sp_v3.0_unigene167888 SustainPine v3.0 283
AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 1.594e-09
N-terminus
sp_v3.0_unigene167988 SustainPine v3.0 253
AutoFact: receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] dbj|BAD25902.1| receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 1.366e-14
Internal
sp_v3.0_unigene167991 SustainPine v3.0 177
AutoFact: MADS-box protein AGL3-a [Brassica oleracea var. botrytis] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168326 SustainPine v3.0 220
AutoFact: protein AGAMOUS-like 65 [Arabidopsis thaliana] gb|AAN37407.1| MADS-box protein AGL65 [Arabidopsis thaliana] gb|AEE29758.1| protein AGAMOUS-like 65 [Arabidopsis thaliana] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Mads box protein, putative 7.401e-07
Internal
sp_v3.0_unigene175733 SustainPine v3.0 436
AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 7.0e-08
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Putative C-terminus
sp_v3.0_unigene177415 SustainPine v3.0 228
putative_coding
sp_v3.0_unigene182894 SustainPine v3.0 1056
AutoFact: heat stress transcription factor B-4 [Arabidopsis thaliana] sp|Q9C635.1|HSFB4_ARATH RecName: Full=Heat stress transcription factor B-4; Short=AtHsfB4; AltName: Full=AtHsf-02 gb|AAG50634.1|AC083835_19 heat shock transcription factor, putative [Arabidopsis 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock factor protein, putative 1.025e-18
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain