Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene162716 SustainPine v3.0 326
AutoFact: Transcription factor WRKY15 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1V7_PHYPA 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene162735 SustainPine v3.0 373
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene162807 SustainPine v3.0 330
AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RDW9_RICCO 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY69-superfamily of TFs having WRKY and zinc finger domains 1.175e-07
Putative C-terminus
sp_v3.0_unigene162975 SustainPine v3.0 291
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.716e-22
Internal
sp_v3.0_unigene162997 SustainPine v3.0 274
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 9.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene163018 SustainPine v3.0 305
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene163285 SustainPine v3.0 475
AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene163414 SustainPine v3.0 284
AutoFact: Retrotransposon protein, putative, Ty1-copia sub-class n=3 Tax=Oryza sativa Japonica Group RepID=Q53ND1_ORYSJ 7.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.197e-10
Internal
sp_v3.0_unigene163523 SustainPine v3.0 244
AutoFact: putative MADS domain transcription factor GGM9 [Gnetum gnemon] 3.0e-23
FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS box protein 4.909e-28
Putative N-terminus
sp_v3.0_unigene163926 SustainPine v3.0 185
AutoFact: bZIP transcription factor BZI-2 [Nicotiana tabacum] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BZIP transcription factor 1.263e-11
Internal
sp_v3.0_unigene164160 SustainPine v3.0 291
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=OSJNBa0054D14.1 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164377 SustainPine v3.0 332
AutoFact: pfam08523, MBF1, Multiprotein bridging factor 1 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multiprotein-bridging factor, putative 5.743e-09
N-terminus
sp_v3.0_unigene164450 SustainPine v3.0 319
AutoFact: Seven trans-membrane protein n=1 Tax=Triticum aestivum RepID=E2RZR5_WHEAT 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mlo family protein 7.852e-33
Internal
sp_v3.0_unigene164544 SustainPine v3.0 313
AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9RX62_RICCO 3.0e-20
FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene164696 SustainPine v3.0 263
AutoFact: Os05g0129800 protein n=1 Tax=Oryza sativa Japonica Group RepID=C7J2F1_ORYSJ 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative WRKY transcription factor 1.898e-09
Putative C-terminus
sp_v3.0_unigene164782 SustainPine v3.0 205
AutoFact: [R] COG2940 Proteins containing SET domain 4.0e-09
FL-Next: sp=Histone-lysine N-methyltransferase CLF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Enhancer of zeste, ezh, putative 1.624e-08
Internal
sp_v3.0_unigene164839 SustainPine v3.0 324
AutoFact: similar to TGA-type basic leucine zipper protein TGA2.1 2.0e-28
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 3.934e-20
Internal
sp_v3.0_unigene164860 SustainPine v3.0 336
AutoFact: MADS-box protein CMB1 n=1 Tax=Dianthus caryophyllus RepID=CMB1_DIACA 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 2.335e-21
Putative N-terminus
sp_v3.0_unigene165079 SustainPine v3.0 174
AutoFact: Unassigned protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165819 SustainPine v3.0 400
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I MADS-box transcription factor 4.873e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain