Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene144191 SustainPine v3.0 674
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144203 SustainPine v3.0 518
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.284e-31
Internal
sp_v3.0_unigene144276 SustainPine v3.0 417
• AutoFact: putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [ 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 2.134e-11
Misassembled
sp_v3.0_unigene144436 SustainPine v3.0 450
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144474 SustainPine v3.0 343
• AutoFact: plastidic phosphate translocator-like protein1 [Mesembryanthemum crystallinum] 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 8.794e-11
Internal
sp_v3.0_unigene144637 SustainPine v3.0 395
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Gag-Pol polyprotein 8.165e-07
Internal
sp_v3.0_unigene144713 SustainPine v3.0 441
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene144781 SustainPine v3.0 343
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 6.254e-08
Putative C-terminus
sp_v3.0_unigene148152 SustainPine v3.0 275
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.602e-19
Internal
sp_v3.0_unigene148196 SustainPine v3.0 252
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 8.0e-35
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: Protein SCARECROW 8.239e-17
Internal
sp_v3.0_unigene148472 SustainPine v3.0 424
• AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene148649 SustainPine v3.0 344
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 2.24208e-44
Internal
sp_v3.0_unigene148901 SustainPine v3.0 276
• AutoFact: RVT_2 domain containing protein 7.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Gag-Pol polyprotein 4.001e-07
Internal
sp_v3.0_unigene149014 SustainPine v3.0 264
• AutoFact: Scarecrow 2 n=1 Tax=Lupinus albus RepID=C9WBB7_LUPAL 2.0e-22
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: Protein SCARECROW 3.051e-17
C-terminus
sp_v3.0_unigene149394 SustainPine v3.0 241
• AutoFact: type II homeodomain-leucine zipper protein precursor [Phillyrea latifolia] 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CRHB10 5.848e-06
Putative C-terminus
sp_v3.0_unigene149569 SustainPine v3.0 207
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 9.23456e-42
Internal
sp_v3.0_unigene149923 SustainPine v3.0 115
• AutoFact: DNA excision repair protein ERCC-1 [Arabidopsis thaliana] sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA excision repair protein ERCC-1; Short=AtERCC1; Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive 7 gb|AAF27027.1|AC009177_17 putative nucleotide repa 5.0e-09
• FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene150375 SustainPine v3.0 387
• AutoFact: ABC transporter n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HXJ0_AZOC5 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene150676 SustainPine v3.0 238
• AutoFact: Protein Dr1 homolog n=1 Tax=Dictyostelium discoideum RepID=NC2B_DICDI 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Repressor protein 2.471e-08
Internal
sp_v3.0_unigene150994 SustainPine v3.0 426
• AutoFact: Multiprotein-bridging factor 1 n=1 Tax=Debaryomyces hansenii CBS767 RepID=MBF1_DEBHA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain