Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene130650 SustainPine v3.0 358
• AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox-leucine zipper protein HAT14 7.184e-11
C-terminus
sp_v3.0_unigene130782 SustainPine v3.0 264
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene130941 SustainPine v3.0 408
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit C-2 1.966e-09
C-terminus
sp_v3.0_unigene131594 SustainPine v3.0 391
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 4.0e-23
• FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Homeobox-leucine zipper-like protein 6.823e-06
Internal
sp_v3.0_unigene131731 SustainPine v3.0 424
• AutoFact: Putative wuschel homeobox protein WOX3 n=1 Tax=Pinus sylvestris RepID=C3W8A1_PINSY 3.0e-29
• FL-Next: tr=Putative wuschel homeobox protein WOX3; Pinus sylvestris (Scots pine). 0.0
• Sma3: Putative wuschel homeobox protein 3.314e-10
N-terminus
sp_v3.0_unigene132008 SustainPine v3.0 453
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 2.067e-09
Complete
sp_v3.0_unigene132297 SustainPine v3.0 576
• AutoFact: Translin associated factor X, putative n=1 Tax=Ricinus communis RepID=B9RE89_RICCO 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene132447 SustainPine v3.0 339
• AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox-leucine zipper protein ATHB-4 1.57e-16
Putative C-terminus
sp_v3.0_unigene132624 SustainPine v3.0 425
• AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SDN5_RICCO 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Internal
sp_v3.0_unigene132798 SustainPine v3.0 281
• AutoFact: High-affinity cationic amino acid transporter 1 n=3 Tax=Andropogoneae RepID=B6U1T8_MAIZE 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132960 SustainPine v3.0 340
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MJZ5_9ASPA 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 5.172e-29
C-terminus
sp_v3.0_unigene133059 SustainPine v3.0 339
• AutoFact: Dehydration responsive element-binding protein 2 n=1 Tax=Gossypium hirsutum RepID=Q6IVL3_GOSHI 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene133598 SustainPine v3.0 266
• AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 7.0e-18
• FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene133602 SustainPine v3.0 460
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene135199 SustainPine v3.0 272
• AutoFact: Os02g0698800 protein n=2 Tax=Oryza sativa RepID=Q6Z8E9_ORYSJ 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative WRKY transcription factor 2.633e-11
Putative C-terminus
sp_v3.0_unigene135716 SustainPine v3.0 263
• AutoFact: DNA-binding protein EMBP-1, putative n=1 Tax=Ricinus communis RepID=B9RZ25_RICCO 3.0e-08
• FL-Next: sp=G-box-binding factor 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: G-box binding protein 2.731e-10
Internal
sp_v3.0_unigene136260 SustainPine v3.0 409
• AutoFact: SMI1_KNR4 domain containing protein 0.0001
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene137502 SustainPine v3.0 289
• AutoFact: similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana] 9.0e-24
• FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Flap endonuclease 1a 5.451e-09
Internal
sp_v3.0_unigene137685 SustainPine v3.0 382
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137872 SustainPine v3.0 355
• AutoFact: multiprotein-bridging factor 1b [Arabidopsis thaliana] sp|Q9LXT3.1|MBF1B_ARATH RecName: Full=Multiprotein-bridging factor 1b gb|AAG40068.1|AF324717_1 AT3g58680 [Arabidopsis thaliana] gb|AAG41491.1|AF326909_1 putative transcriptional coactivator protein [A 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multiprotein bridging factor 1 1.158e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain