Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4757 SustainPine v3.0 964
AutoFact: Heat Shock Factor 3 [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4810 SustainPine v3.0 803
AutoFact: Cell division control protein 15 , cdc15, putative n=1 Tax=Ricinus communis RepID=B9S4I8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.409e-13
Internal
sp_v3.0_unigene4972 SustainPine v3.0 744
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 7.883e-13
Internal
sp_v3.0_unigene4974 SustainPine v3.0 2436
AutoFact: kinesin-related protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 5.996e-20
C-terminus
sp_v3.0_unigene5163 SustainPine v3.0 432
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 8.0e-17
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 4.063e-13
Putative N-terminus
sp_v3.0_unigene5314 SustainPine v3.0 3025
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 4.845e-13
Complete
sp_v3.0_unigene5446 SustainPine v3.0 1387
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SRK5_PHYPA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5461 SustainPine v3.0 2085
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 8.929e-18
C-terminus
sp_v3.0_unigene5802 SustainPine v3.0 1134
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SEE4_RICCO 0.0
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Sma3: Lil3 protein 2.748e-17
Complete
sp_v3.0_unigene5806 SustainPine v3.0 1838
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.898e-13
Internal
sp_v3.0_unigene5859 SustainPine v3.0 2462
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: Isoform 1S of Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 0.0
Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 3.345e-13
Complete
sp_v3.0_unigene5923 SustainPine v3.0 2173
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger-homeodomain protein 1 1.799e-20
Complete
sp_v3.0_unigene6036 SustainPine v3.0 1259
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6052 SustainPine v3.0 2868
AutoFact: Noc2p family protein [Arabidopsis thaliana] dbj|BAE98878.1| hypothetical protein [Arabidopsis thaliana] gb|AEE79394.1| Noc2p family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Nucleolar complex protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein NOC2 homolog 1.147e-09
N-terminus
sp_v3.0_unigene6159 SustainPine v3.0 1715
AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC 0.0
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: DNA repair protein RAD51 homolog 0.0
Complete
sp_v3.0_unigene6246 SustainPine v3.0 2090
AutoFact: WRKY transcription factor 1 [Physcomitrella patens] gb|AAL78681.1| WRKY transcription factor 1 [Physcomitrella patens] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 2.156e-17
Complete
sp_v3.0_unigene6303 SustainPine v3.0 821
AutoFact: pfam00046, Homeobox, Homeobox domain 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 3.313e-06
N-terminus
sp_v3.0_unigene6386 SustainPine v3.0 1646
AutoFact: NADH-cytochrome b5 reductase-like protein [Arabidopsis thaliana] sp|P83291.2|NCB5R_ARATH RecName: Full=NADH-cytochrome b5 reductase-like protein; Short=B5R gb|AAM64833.1| cytochrome-b5 reductase-like protein [Arabidopsis thaliana] gb|ABD59058.1| At5g20080 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NADH-cytochrome b5 reductase-like protein 1.353e-11
Complete
sp_v3.0_unigene6388 SustainPine v3.0 2900
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 5.028e-13
Putative Complete
sp_v3.0_unigene6404 SustainPine v3.0 1294
AutoFact: Transcription factor hy5, putative n=1 Tax=Ricinus communis RepID=B9RP68_RICCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain