Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene123041 SustainPine v3.0 518
• AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
• FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123517 SustainPine v3.0 203
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-27
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.494e-24
Internal
sp_v3.0_unigene123844 SustainPine v3.0 445
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 6.0e-22
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene124229 SustainPine v3.0 328
• AutoFact: bZip protein AtbZip21 [Arabidopsis thaliana] 9.0e-11
• FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: BZIP transcription factor 3.398e-13
C-terminus
sp_v3.0_unigene124949 SustainPine v3.0 303
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene125273 SustainPine v3.0 302
• AutoFact: Protein kinase n=4 Tax=Andropogoneae RepID=B6SY15_MAIZE 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 8.681e-13
Internal
sp_v3.0_unigene125424 SustainPine v3.0 395
• AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ9_MALDO 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene125761 SustainPine v3.0 129
• AutoFact: Class III HD-zip protein n=1 Tax=Gossypium barbadense RepID=A4IF05_GOSBA 1.0e-06
• FL-Next: tr=Class III homeodomain-leucine zipper protein C3HDZ2; Taxus globosa. 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.236e-12
Internal
sp_v3.0_unigene126100 SustainPine v3.0 657
• AutoFact: WRKY transcription factor PmWRKY117 (Fragment) n=1 Tax=Pinus monticola RepID=E6Y3E9_PINMO 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 2.897e-19
Putative N-terminus
sp_v3.0_unigene126156 SustainPine v3.0 384
• AutoFact: homeobox-leucine zipper protein [Glycine max] 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.601e-17
Internal
sp_v3.0_unigene126172 SustainPine v3.0 1184
• AutoFact: MADS box protein n=6 Tax=Cucurbitaceae RepID=C5IS80_CUCSA 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene126291 SustainPine v3.0 424
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 6.0e-27
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeodomain-related 1.159e-06
Internal
sp_v3.0_unigene126331 SustainPine v3.0 257
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 1.0e-16
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene126339 SustainPine v3.0 291
• AutoFact: HD domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ03_MALDO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox-leucine zipper protein ATHB-4 1.298e-16
Internal
sp_v3.0_unigene127100 SustainPine v3.0 859
• AutoFact: Cytochrome b5 reductase isoform II n=3 Tax=Andropogoneae RepID=Q8W2K4_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADH-cytochrome b5 reductase 2.48e-11
C-terminus
sp_v3.0_unigene127216 SustainPine v3.0 1047
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS box transcription factor PrMADS6 0.0
Complete
sp_v3.0_unigene127288 SustainPine v3.0 1299
• AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127297 SustainPine v3.0 1251
• AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] sp|Q3E6T0.1|PT525_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At5g25400 gb|AED93436.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 4.613e-11
Putative Complete
sp_v3.0_unigene127460 SustainPine v3.0 839
• AutoFact: plastidic phosphate translocator-like protein1 [Mesembryanthemum crystallinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 1.16e-10
N-terminus
sp_v3.0_unigene127461 SustainPine v3.0 957
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain