Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3639 SustainPine v3.0 1351
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Complete
sp_v3.0_unigene3651 SustainPine v3.0 1047
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3753 SustainPine v3.0 3829
AutoFact: enhancer of zeste-like 1 [Zea mays] 0.0
FL-Next: sp=Histone-lysine N-methyltransferase EZ1; Zea mays (Maize). 0.0
Sma3: Enhancer of zeste, ezh, putative 1.79e-08
Complete
sp_v3.0_unigene3780 SustainPine v3.0 2994
AutoFact: homeodomain protein HOX3 [Gossypium hirsutum] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 7.562e-18
Complete
sp_v3.0_unigene3809 SustainPine v3.0 1437
AutoFact: homeodomain protein HB2 [Populus tomentosa] 0.0
FL-Next: sp=WUSCHEL-related homeobox 8; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: WUSCHEL-related homeobox 14 3.401e-08
Complete
sp_v3.0_unigene3812 SustainPine v3.0 1428
AutoFact: protein AGAMOUS-like 65 [Arabidopsis thaliana] gb|AAN37407.1| MADS-box protein AGL65 [Arabidopsis thaliana] gb|AEE29758.1| protein AGAMOUS-like 65 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative MADS-domain transcription factor 3.821e-06
Complete
sp_v3.0_unigene3875 SustainPine v3.0 2496
AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9T452_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3976 SustainPine v3.0 2520
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 3.514e-27
Complete
sp_v3.0_unigene4047 SustainPine v3.0 2394
AutoFact: bZIP transcription factor bZIP50 [Glycine max] 0.0
FL-Next: sp=Probable transcription factor PosF21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4059 SustainPine v3.0 2661
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4126 SustainPine v3.0 1157
AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BZIP transcription factor 1.349e-14
C-terminus
sp_v3.0_unigene4155 SustainPine v3.0 2052
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Repressor protein 4.391e-11
Complete
sp_v3.0_unigene4156 SustainPine v3.0 1979
AutoFact: pfam00170, bZIP_1, bZIP transcription factor 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4166 SustainPine v3.0 2860
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4227 SustainPine v3.0 2357
AutoFact: octopine synthase binding factor3 [Zea mays] emb|CAA48904.1| ocs-element binding factor 3.2 [Zea mays] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4287 SustainPine v3.0 937
AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 1.066e-06
C-terminus
sp_v3.0_unigene4289 SustainPine v3.0 525
AutoFact: Os02g0203000 protein n=2 Tax=Oryza sativa RepID=Q0E2Y8_ORYSJ 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor HY5 1.887e-18
Putative Complete
sp_v3.0_unigene4381 SustainPine v3.0 609
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene4424 SustainPine v3.0 891
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.935e-17
Putative Complete
sp_v3.0_unigene4481 SustainPine v3.0 868
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 5.939e-30
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain