Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene39359 SustainPine v3.0 835
• AutoFact: K-box domain containing protein 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene39508 SustainPine v3.0 1708
• AutoFact: endonuclease [Arabidopsis thaliana] 0.0
• FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene39972 SustainPine v3.0 326
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene40357 SustainPine v3.0 399
• AutoFact: GATA transcription factor 18 n=3 Tax=Arabidopsis RepID=GAT18_ARATH 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein-like 3.099e-08
Internal
sp_v3.0_unigene40758 SustainPine v3.0 750
• AutoFact: homeobox-leucine zipper protein [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 4.625e-19
Internal
sp_v3.0_unigene41003 SustainPine v3.0 2588
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.424e-18
Putative C-terminus
sp_v3.0_unigene41320 SustainPine v3.0 123
• AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX15; AltName: Full=HD-ZIP protein HOX15; AltName: Full=Homeodomain transcription factor HOX15; AltName: Full=OsHox15 gb|AAL91609.1|AC099400_15 Putative homeobox protein HAT22 [Oryza sativa Japonica Group] gb 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox-leucine zipper protein ATHB-4 1.206e-16
Internal
sp_v3.0_unigene41395 SustainPine v3.0 186
• AutoFact: Carboxy-terminal kinesin, putative n=1 Tax=Ricinus communis RepID=B9RRL2_RICCO 2.0e-24
• FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Phragmoplast-associated kinesin-related protein 1 5.438e-08
Internal
sp_v3.0_unigene42681 SustainPine v3.0 874
• AutoFact: Heat stress transcription factor A-2c n=3 Tax=Oryza sativa RepID=HFA2C_ORYSJ 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42837 SustainPine v3.0 200
• AutoFact: Kinesin, putative n=1 Tax=Ricinus communis RepID=B9SS38_RICCO 6.0e-27
• FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Kinesin-like protein 3.137e-22
Internal
sp_v3.0_unigene43038 SustainPine v3.0 923
• AutoFact: GATA-type zinc finger transcription factor-like n=2 Tax=Oryza sativa RepID=Q8LR32_ORYSJ 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA transcription factor 19 6.505e-09
C-terminus
sp_v3.0_unigene43797 SustainPine v3.0 149
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 8.0e-14
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.085e-09
Internal
sp_v3.0_unigene44120 SustainPine v3.0 232
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 5.0e-27
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 6.086e-11
Internal
sp_v3.0_unigene44160 SustainPine v3.0 490
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRG8_RICCO 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein HSF30 1.459e-11
Internal
sp_v3.0_unigene44422 SustainPine v3.0 830
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene44472 SustainPine v3.0 2077
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene44820 SustainPine v3.0 907
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene45000 SustainPine v3.0 329
• AutoFact: Class III HD-Zip protein HDZ31 (Fragment) n=1 Tax=Ceratopteris richardii RepID=Q0Q426_CERRI 6.0e-14
• FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 3.253e-32
Internal
sp_v3.0_unigene45503 SustainPine v3.0 418
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 8.99999e-40
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Putative wuschel homeobox protein 5.273e-07
Internal
sp_v3.0_unigene45737 SustainPine v3.0 188
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.973e-10
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain