Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2056 SustainPine v3.0 3082
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
FL-Next: sp=Probable WRKY transcription factor 33; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WRKY transcription factor 6.17e-12
Complete
sp_v3.0_unigene2098 SustainPine v3.0 683
AutoFact: TPA_inf: WRKY transcription factor 7 [Oryza sativa (japonica cultivar-group)] gb|AAT39221.1| 'unknown protein, contains WRKY DNA -binding domain' [Oryza sativa Japonica Group] gb|ABC02807.1| WRKY transcription factor 7 [Oryza sativa] gb|EEE64508.1| hypoth 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 9.008e-23
Putative Complete
sp_v3.0_unigene2105 SustainPine v3.0 1421
AutoFact: Putative wuschel homeobox protein WOX2 n=2 Tax=Pinus RepID=C3W8A2_PINSY 0.0
FL-Next: tr=Putative wuschel homeobox protein WOX2; Pinus sylvestris (Scots pine). 0.0
Sma3: Homeodomain transcription factor 0.0
Complete
sp_v3.0_unigene2290 SustainPine v3.0 1507
AutoFact: GATA transcription factor 12 n=2 Tax=Arabidopsis thaliana RepID=GAT12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 8.923e-18
Complete
sp_v3.0_unigene2640 SustainPine v3.0 3025
AutoFact: TPA_inf: WRKY transcription factor 29 [Oryza sativa (japonica cultivar-group)] gb|EAZ02533.1| hypothetical protein OsI_24642 [Oryza sativa Indica Group] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 3.559e-11
Complete
sp_v3.0_unigene2667 SustainPine v3.0 3972
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeodomain protein HB2 0.0
Complete
sp_v3.0_unigene2824 SustainPine v3.0 442
AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] dbj|BAC42143.1| putative bzip transcription factor atbzip23 [Arabidopsis thaliana] gb|ABI93931.1| At2g16770 [Arabidopsis thaliana] gb|AEC06536.1| basic helix-loop-helix domain-contain 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene3164 SustainPine v3.0 4013
AutoFact: Phospholipid-transporting atpase, putative n=1 Tax=Ricinus communis RepID=B9SRT5_RICCO 0.0
FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Aminophospholipid ATPase 1.662e-16
C-terminus
sp_v3.0_unigene3189 SustainPine v3.0 3992
AutoFact: Nop14 multi-domain protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3196 SustainPine v3.0 2305
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 8.568e-15
Complete
sp_v3.0_unigene3203 SustainPine v3.0 1068
AutoFact: RAD-like 6 protein [Arabidopsis thaliana] gb|ABD24442.1| RAD-like protein 6 [Arabidopsis thaliana] gb|AEE35694.1| RAD-like 6 protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RADIALIS 4.403e-15
Complete
sp_v3.0_unigene3305 SustainPine v3.0 4215
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.959e-11
Complete
sp_v3.0_unigene3315 SustainPine v3.0 1607
AutoFact: ZF-HD homeobox protein [Flaveria bidentis] 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger-homeodomain protein 1 1.381e-24
C-terminus
sp_v3.0_unigene3398 SustainPine v3.0 996
AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 4.196e-11
C-terminus
sp_v3.0_unigene3436 SustainPine v3.0 1682
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3444 SustainPine v3.0 3832
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Associated with HOX family protein, expressed 6.029e-15
Complete
sp_v3.0_unigene3463 SustainPine v3.0 1474
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
FL-Next: sp=WUSCHEL-related homeobox 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative wuschel homeobox protein 5.629e-07
Complete
sp_v3.0_unigene3483 SustainPine v3.0 1023
AutoFact: Endonuclease n=1 Tax=Cucumis melo subsp. melo RepID=E5GCK8_CUCME 0.0
FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene3491 SustainPine v3.0 938
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 3.515e-38
Putative Complete
sp_v3.0_unigene3638 SustainPine v3.0 1240
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 2.0e-39
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain