Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32368 SustainPine v3.0 807
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger homeodomain protein 1 7.784e-21
Complete
sp_v3.0_unigene32387 SustainPine v3.0 555
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger homeodomain protein 1 6.909e-21
C-terminus
sp_v3.0_unigene32645 SustainPine v3.0 877
• AutoFact: putative MADS box transcription factor PrMADS5 [Pinus radiata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.213e-21
Putative Complete
sp_v3.0_unigene32649 SustainPine v3.0 695
• AutoFact: Transcription factor WRKY15 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1V7_PHYPA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene32790 SustainPine v3.0 790
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.741e-26
N-terminus
sp_v3.0_unigene32901 SustainPine v3.0 753
• AutoFact: Isoform 2 of MADS-box transcription factor 7 n=1 Tax=Oryza sativa Japonica Group RepID=Q0J466-2 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene33014 SustainPine v3.0 511
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 7.0e-25
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box protein 1.03e-19
N-terminus
sp_v3.0_unigene33418 SustainPine v3.0 341
• AutoFact: MADS-box transcription factor SEP1 n=1 Tax=Agapanthus praecox RepID=Q84L85_AGAPR 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 1.336e-27
N-terminus
sp_v3.0_unigene33478 SustainPine v3.0 847
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ZF-HD homeobox protein 5.393e-18
Complete
sp_v3.0_unigene34484 SustainPine v3.0 791
• AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 1.358e-23
Complete
sp_v3.0_unigene34724 SustainPine v3.0 809
• AutoFact: AG-motif binding protein-2 n=1 Tax=Nicotiana tabacum RepID=Q76DY2_TOBAC 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GATA zinc finger family protein 5.167e-16
Putative Complete
sp_v3.0_unigene34741 SustainPine v3.0 795
• AutoFact: Homeobox transcription factor KN1 n=3 Tax=Pinaceae RepID=Q5SC65_PINTA 0.0
• FL-Next: tr=Homeobox transcription factor KN1; Pinus taeda (Loblolly pine). 0.0
• Sma3: Homeobox protein knotted-1-like 1 2.516e-07
C-terminus
sp_v3.0_unigene34779 SustainPine v3.0 464
• AutoFact: Heat stress transcription factor B-4c n=3 Tax=Oryza sativa RepID=HFB4C_ORYSJ 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock transcription factor 6.056e-20
Internal
sp_v3.0_unigene34786 SustainPine v3.0 471
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RG57_RICCO 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene34787 SustainPine v3.0 680
• AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: MADS-box protein 3.941e-17
Complete
sp_v3.0_unigene34791 SustainPine v3.0 985
• AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ccaat-binding transcription factor, putative 3.51e-26
Complete
sp_v3.0_unigene34820 SustainPine v3.0 571
• AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Floricaula 1.001e-33
C-terminus
sp_v3.0_unigene35107 SustainPine v3.0 912
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 2.458e-15
N-terminus
sp_v3.0_unigene35173 SustainPine v3.0 928
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.907e-18
Putative Complete
sp_v3.0_unigene35200 SustainPine v3.0 1656
• AutoFact: HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] dbj|BAD37897.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] gb|EEC80299.1| hypothetical protein OsI_22321 [Oryza sativa Indica Grou 0.0
• FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain