Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25054 SustainPine v3.0 852
• AutoFact: transcription factor-like protein [Arabidopsis thaliana] 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene25246 SustainPine v3.0 1608
• AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
• FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: BZIP transcription factor 4.659e-19
C-terminus
sp_v3.0_unigene25535 SustainPine v3.0 1222
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 0.0
• FL-Next: tr=MADS-box transcription factor; Cycas edentata. 0.0
• Sma3: AGAMOUS-like protein 0.0
Complete
sp_v3.0_unigene25542 SustainPine v3.0 539
• AutoFact: [D] COG0206 Cell division GTPase 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.369e-19
Putative N-terminus
sp_v3.0_unigene25572 SustainPine v3.0 555
• AutoFact: MADS-box transcription factor TaAGL28 n=9 Tax=Pooideae RepID=Q1G180_WHEAT 1.0e-24
• FL-Next: tr=Dal1 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box transcription factor 2.644e-17
N-terminus
sp_v3.0_unigene26027 SustainPine v3.0 822
• AutoFact: Endonuclease III, putative n=1 Tax=Ricinus communis RepID=B9T798_RICCO 1.4013e-45
• FL-Next: tr=Endonuclease III, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene26105 SustainPine v3.0 683
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene26306 SustainPine v3.0 630
• AutoFact: WRKY transcription factor 5 [Solanum tuberosum] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 8.853e-20
Putative C-terminus
sp_v3.0_unigene26344 SustainPine v3.0 1295
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.60519e-45
• FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
• Sma3: MADS-box transcription factor 1.008e-23
Complete
sp_v3.0_unigene26590 SustainPine v3.0 1886
• AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 1.047e-18
Complete
sp_v3.0_unigene26678 SustainPine v3.0 997
• AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BZIP transcription factor 1.106e-19
C-terminus
sp_v3.0_unigene26952 SustainPine v3.0 1114
• AutoFact: ATPase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Phospholipid-transporting ATPase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Aminophospholipid ATPase 4.548e-17
C-terminus
sp_v3.0_unigene27042 SustainPine v3.0 179
• AutoFact: Unassigned protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene27500 SustainPine v3.0 1076
• AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 7.534e-17
Complete
sp_v3.0_unigene27551 SustainPine v3.0 1128
• AutoFact: nuclear transcription factor Y subunit B-2 [Arabidopsis thaliana] sp|Q9FGJ3.1|NFYB2_ARATH RecName: Full=Nuclear transcription factor Y subunit B-2; Short=AtNF-YB-2; AltName: Full=Transcriptional activator HAP3B gb|AAK60334.1|AF385744_1 AT5g47640/MNJ7_23 [ 7.00005e-41
• FL-Next: sp=Nuclear transcription factor Y subunit B-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 4.01899e-40
Complete
sp_v3.0_unigene27633 SustainPine v3.0 879
• AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
• FL-Next: tr=CCAAT-box binding factor HAP3-like protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 6.658e-36
Complete
sp_v3.0_unigene27786 SustainPine v3.0 2437
• AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Heat shock factor protein HSF30 1.683e-11
Complete
sp_v3.0_unigene27927 SustainPine v3.0 616
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 4.06377e-44
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 3.585e-28
N-terminus
sp_v3.0_unigene27933 SustainPine v3.0 548
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27975 SustainPine v3.0 1486
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: BZIP transcription factor 3.565e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain